Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CPT1AP50416 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CPT1AP50416 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CPT1AP50416 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CPT1AP50416 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CPT1AP50416 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CPT1AP50416 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CPT1AP50416 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.62■■■□□ 2.49
CPT1AP50416 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.61■■■□□ 2.49
CPT1AP50416 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CPT1AP50416 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CPT1AP50416 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CPT1AP50416 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.6■■■□□ 2.49
CPT1AP50416 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.6■■■□□ 2.49
CPT1AP50416 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CPT1AP50416 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
CPT1AP50416 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
CPT1AP50416 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.58■■■□□ 2.49
CPT1AP50416 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CPT1AP50416 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.56■■■□□ 2.48
CPT1AP50416 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.56■■■□□ 2.48
CPT1AP50416 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.56■■■□□ 2.48
CPT1AP50416 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CPT1AP50416 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.55■■■□□ 2.48
CPT1AP50416 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.55■■■□□ 2.48
CPT1AP50416 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CPT1AP50416 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPT1AP50416 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPT1AP50416 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.53■■■□□ 2.48
CPT1AP50416 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPT1AP50416 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CPT1AP50416 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CPT1AP50416 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.5■■■□□ 2.47
CPT1AP50416 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.5■■■□□ 2.47
CPT1AP50416 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.49■■■□□ 2.47
CPT1AP50416 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CPT1AP50416 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CPT1AP50416 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CPT1AP50416 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CPT1AP50416 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CPT1AP50416 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CPT1AP50416 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CPT1AP50416 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CPT1AP50416 ZNRF2P2-203ENST00000454624 420 ntBASIC30.44■■■□□ 2.46
CPT1AP50416 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.44■■■□□ 2.46
CPT1AP50416 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CPT1AP50416 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.43■■■□□ 2.46
CPT1AP50416 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CPT1AP50416 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CPT1AP50416 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CPT1AP50416 HLA-V-202ENST00000446817 847 ntBASIC30.4■■■□□ 2.46
CPT1AP50416 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CPT1AP50416 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CPT1AP50416 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CPT1AP50416 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.38■■■□□ 2.45
CPT1AP50416 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CPT1AP50416 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.37■■■□□ 2.45
CPT1AP50416 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CPT1AP50416 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.37■■■□□ 2.45
CPT1AP50416 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.36■■■□□ 2.45
CPT1AP50416 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.36■■■□□ 2.45
CPT1AP50416 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.36■■■□□ 2.45
CPT1AP50416 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CPT1AP50416 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CPT1AP50416 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CPT1AP50416 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.32■■■□□ 2.44
CPT1AP50416 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.32■■■□□ 2.44
CPT1AP50416 DUX4L29-201ENST00000425409 679 ntBASIC30.32■■■□□ 2.44
CPT1AP50416 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CPT1AP50416 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.31■■■□□ 2.44
CPT1AP50416 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CPT1AP50416 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CPT1AP50416 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CPT1AP50416 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.26■■■□□ 2.43
CPT1AP50416 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.25■■■□□ 2.43
CPT1AP50416 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CPT1AP50416 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CPT1AP50416 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.24■■■□□ 2.43
CPT1AP50416 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
CPT1AP50416 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CPT1AP50416 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.23■■■□□ 2.43
CPT1AP50416 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.23■■■□□ 2.43
CPT1AP50416 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.23■■■□□ 2.43
CPT1AP50416 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.21■■■□□ 2.43
CPT1AP50416 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CPT1AP50416 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CPT1AP50416 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
CPT1AP50416 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CPT1AP50416 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CPT1AP50416 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CPT1AP50416 AC108673.1-201ENST00000510422 1159 ntBASIC30.19■■■□□ 2.42
CPT1AP50416 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.19■■■□□ 2.42
CPT1AP50416 AC021231.2-201ENST00000594613 730 ntBASIC30.19■■■□□ 2.42
CPT1AP50416 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CPT1AP50416 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CPT1AP50416 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
CPT1AP50416 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.17■■■□□ 2.42
CPT1AP50416 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CPT1AP50416 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
CPT1AP50416 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms