Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.17■■■□□ 2.42
RFC2P35250 WASH5P-204ENST00000632292 975 ntBASIC30.17■■■□□ 2.42
RFC2P35250 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RFC2P35250 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RFC2P35250 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RFC2P35250 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.12■■■□□ 2.41
RFC2P35250 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RFC2P35250 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.1■■■□□ 2.41
RFC2P35250 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RFC2P35250 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RFC2P35250 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.08■■■□□ 2.41
RFC2P35250 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.08■■■□□ 2.41
RFC2P35250 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RFC2P35250 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RFC2P35250 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.07■■■□□ 2.4
RFC2P35250 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
RFC2P35250 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RFC2P35250 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.06■■■□□ 2.4
RFC2P35250 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RFC2P35250 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RFC2P35250 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
RFC2P35250 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
RFC2P35250 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RFC2P35250 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RFC2P35250 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
RFC2P35250 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RFC2P35250 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.01■■■□□ 2.39
RFC2P35250 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RFC2P35250 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
RFC2P35250 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
RFC2P35250 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
RFC2P35250 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RFC2P35250 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.97■■■□□ 2.39
RFC2P35250 DUX4L29-201ENST00000425409 679 ntBASIC29.97■■■□□ 2.39
RFC2P35250 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.95■■■□□ 2.39
RFC2P35250 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RFC2P35250 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.93■■■□□ 2.38
RFC2P35250 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RFC2P35250 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RFC2P35250 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RFC2P35250 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
RFC2P35250 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RFC2P35250 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.88■■■□□ 2.37
RFC2P35250 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RFC2P35250 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RFC2P35250 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RFC2P35250 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RFC2P35250 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RFC2P35250 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RFC2P35250 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RFC2P35250 MIR4449-201ENST00000578365 66 ntBASIC29.83■■■□□ 2.37
RFC2P35250 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RFC2P35250 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.82■■■□□ 2.36
RFC2P35250 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.81■■■□□ 2.36
RFC2P35250 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.81■■■□□ 2.36
RFC2P35250 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.8■■■□□ 2.36
RFC2P35250 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RFC2P35250 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.8■■■□□ 2.36
RFC2P35250 AC021231.2-201ENST00000594613 730 ntBASIC29.8■■■□□ 2.36
RFC2P35250 MIR639-201ENST00000384974 98 ntBASIC29.78■■■□□ 2.36
RFC2P35250 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RFC2P35250 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RFC2P35250 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RFC2P35250 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.76■■■□□ 2.35
RFC2P35250 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RFC2P35250 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
RFC2P35250 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
RFC2P35250 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.74■■■□□ 2.35
RFC2P35250 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.73■■■□□ 2.35
RFC2P35250 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RFC2P35250 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.73■■■□□ 2.35
RFC2P35250 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
RFC2P35250 AC108673.1-201ENST00000510422 1159 ntBASIC29.72■■■□□ 2.35
RFC2P35250 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RFC2P35250 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RFC2P35250 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RFC2P35250 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
RFC2P35250 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
RFC2P35250 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.68■■■□□ 2.34
RFC2P35250 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.68■■■□□ 2.34
RFC2P35250 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RFC2P35250 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RFC2P35250 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RFC2P35250 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RFC2P35250 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.65■■■□□ 2.34
RFC2P35250 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.65■■■□□ 2.34
RFC2P35250 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
RFC2P35250 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RFC2P35250 MIR3648-2-201ENST00000581792 180 ntBASIC29.63■■■□□ 2.33
RFC2P35250 MIR3648-1-201ENST00000615959 180 ntBASIC29.63■■■□□ 2.33
RFC2P35250 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RFC2P35250 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RFC2P35250 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RFC2P35250 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.6■■■□□ 2.33
RFC2P35250 MIR6090-201ENST00000622481 60 ntBASIC29.6■■■□□ 2.33
RFC2P35250 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.6■■■□□ 2.33
RFC2P35250 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RFC2P35250 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.59■■■□□ 2.33
RFC2P35250 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RFC2P35250 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms