Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PSMC3P17980 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
PSMC3P17980 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PSMC3P17980 WASH5P-204ENST00000632292 975 ntBASIC28.39■■■□□ 2.14
PSMC3P17980 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
PSMC3P17980 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
PSMC3P17980 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PSMC3P17980 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PSMC3P17980 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PSMC3P17980 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.34■■■□□ 2.13
PSMC3P17980 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PSMC3P17980 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.32■■■□□ 2.12
PSMC3P17980 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
PSMC3P17980 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PSMC3P17980 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PSMC3P17980 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PSMC3P17980 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.3■■■□□ 2.12
PSMC3P17980 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.3■■■□□ 2.12
PSMC3P17980 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PSMC3P17980 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PSMC3P17980 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.28■■■□□ 2.12
PSMC3P17980 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.27■■■□□ 2.12
PSMC3P17980 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
PSMC3P17980 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.26■■■□□ 2.11
PSMC3P17980 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.26■■■□□ 2.11
PSMC3P17980 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.26■■■□□ 2.11
PSMC3P17980 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PSMC3P17980 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.24■■■□□ 2.11
PSMC3P17980 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
PSMC3P17980 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PSMC3P17980 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PSMC3P17980 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PSMC3P17980 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PSMC3P17980 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PSMC3P17980 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.2■■■□□ 2.1
PSMC3P17980 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PSMC3P17980 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PSMC3P17980 HLA-V-202ENST00000446817 847 ntBASIC28.19■■■□□ 2.1
PSMC3P17980 ZNRF2P2-203ENST00000454624 420 ntBASIC28.19■■■□□ 2.1
PSMC3P17980 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PSMC3P17980 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.18■■■□□ 2.1
PSMC3P17980 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PSMC3P17980 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PSMC3P17980 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.17■■■□□ 2.1
PSMC3P17980 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PSMC3P17980 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PSMC3P17980 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PSMC3P17980 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PSMC3P17980 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PSMC3P17980 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
PSMC3P17980 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.11■■■□□ 2.09
PSMC3P17980 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.09■■■□□ 2.09
PSMC3P17980 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PSMC3P17980 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PSMC3P17980 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.08■■■□□ 2.09
PSMC3P17980 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
PSMC3P17980 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PSMC3P17980 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
PSMC3P17980 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PSMC3P17980 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.06■■■□□ 2.08
PSMC3P17980 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PSMC3P17980 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.06■■■□□ 2.08
PSMC3P17980 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.06■■■□□ 2.08
PSMC3P17980 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PSMC3P17980 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.05■■■□□ 2.08
PSMC3P17980 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PSMC3P17980 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PSMC3P17980 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PSMC3P17980 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.04■■■□□ 2.08
PSMC3P17980 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PSMC3P17980 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.04■■■□□ 2.08
PSMC3P17980 DUX4L29-201ENST00000425409 679 ntBASIC28.03■■■□□ 2.08
PSMC3P17980 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PSMC3P17980 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PSMC3P17980 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.02■■■□□ 2.08
PSMC3P17980 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PSMC3P17980 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
PSMC3P17980 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PSMC3P17980 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.99■■■□□ 2.07
PSMC3P17980 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.98■■■□□ 2.07
PSMC3P17980 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PSMC3P17980 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PSMC3P17980 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PSMC3P17980 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PSMC3P17980 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
PSMC3P17980 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
PSMC3P17980 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PSMC3P17980 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.94■■■□□ 2.06
PSMC3P17980 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PSMC3P17980 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
PSMC3P17980 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PSMC3P17980 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.91■■■□□ 2.06
PSMC3P17980 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.91■■■□□ 2.06
PSMC3P17980 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
PSMC3P17980 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.9■■■□□ 2.06
PSMC3P17980 AC021231.2-201ENST00000594613 730 ntBASIC27.9■■■□□ 2.06
PSMC3P17980 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms