Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.62■■■□□ 2.49
SYN1P17600 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.62■■■□□ 2.49
SYN1P17600 HSD17B1P1-201ENST00000590052 955 ntBASIC30.62■■■□□ 2.49
SYN1P17600 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.58■■■□□ 2.49
SYN1P17600 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SYN1P17600 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SYN1P17600 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SYN1P17600 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SYN1P17600 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.55■■■□□ 2.48
SYN1P17600 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SYN1P17600 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SYN1P17600 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SYN1P17600 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.54■■■□□ 2.48
SYN1P17600 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.53■■■□□ 2.48
SYN1P17600 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.52■■■□□ 2.48
SYN1P17600 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.51■■■□□ 2.47
SYN1P17600 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SYN1P17600 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SYN1P17600 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SYN1P17600 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.49■■■□□ 2.47
SYN1P17600 AC016575.1-201ENST00000607026 382 ntBASIC30.48■■■□□ 2.47
SYN1P17600 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.47■■■□□ 2.47
SYN1P17600 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
SYN1P17600 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.47■■■□□ 2.47
SYN1P17600 AC021231.2-201ENST00000594613 730 ntBASIC30.46■■■□□ 2.47
SYN1P17600 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.46■■■□□ 2.47
SYN1P17600 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SYN1P17600 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.43■■■□□ 2.46
SYN1P17600 MIR3648-2-201ENST00000581792 180 ntBASIC30.41■■■□□ 2.46
SYN1P17600 MIR3648-1-201ENST00000615959 180 ntBASIC30.41■■■□□ 2.46
SYN1P17600 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.41■■■□□ 2.46
SYN1P17600 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SYN1P17600 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.39■■■□□ 2.46
SYN1P17600 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SYN1P17600 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.38■■■□□ 2.45
SYN1P17600 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SYN1P17600 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SYN1P17600 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.35■■■□□ 2.45
SYN1P17600 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.35■■■□□ 2.45
SYN1P17600 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.34■■■□□ 2.45
SYN1P17600 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.34■■■□□ 2.45
SYN1P17600 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SYN1P17600 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SYN1P17600 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.3■■■□□ 2.44
SYN1P17600 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SYN1P17600 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SYN1P17600 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SYN1P17600 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
SYN1P17600 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SYN1P17600 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SYN1P17600 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SYN1P17600 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SYN1P17600 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.27■■■□□ 2.44
SYN1P17600 WASH5P-204ENST00000632292 975 ntBASIC30.27■■■□□ 2.44
SYN1P17600 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.26■■■□□ 2.43
SYN1P17600 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.26■■■□□ 2.43
SYN1P17600 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SYN1P17600 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SYN1P17600 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.24■■■□□ 2.43
SYN1P17600 CR559946.2-201ENST00000623684 991 ntBASIC30.23■■■□□ 2.43
SYN1P17600 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
SYN1P17600 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SYN1P17600 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SYN1P17600 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SYN1P17600 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SYN1P17600 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SYN1P17600 DUX4L11-201ENST00000611504 1267 ntBASIC30.18■■■□□ 2.42
SYN1P17600 DUX4L12-201ENST00000614593 1267 ntBASIC30.18■■■□□ 2.42
SYN1P17600 DUX4L14-201ENST00000621227 1267 ntBASIC30.18■■■□□ 2.42
SYN1P17600 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SYN1P17600 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SYN1P17600 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.17■■■□□ 2.42
SYN1P17600 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SYN1P17600 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
SYN1P17600 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SYN1P17600 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SYN1P17600 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
SYN1P17600 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SYN1P17600 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.13■■■□□ 2.41
SYN1P17600 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
SYN1P17600 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
SYN1P17600 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.11■■■□□ 2.41
SYN1P17600 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.11■■■□□ 2.41
SYN1P17600 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
SYN1P17600 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SYN1P17600 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SYN1P17600 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.09■■■□□ 2.41
SYN1P17600 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SYN1P17600 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SYN1P17600 MIR6090-201ENST00000622481 60 ntBASIC30.08■■■□□ 2.41
SYN1P17600 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.06■■■□□ 2.4
SYN1P17600 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.06■■■□□ 2.4
SYN1P17600 LINC01971-201ENST00000617888 1048 ntBASIC30.06■■■□□ 2.4
SYN1P17600 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.05■■■□□ 2.4
SYN1P17600 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.05■■■□□ 2.4
SYN1P17600 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
SYN1P17600 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
SYN1P17600 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
SYN1P17600 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
SYN1P17600 AC108673.1-201ENST00000510422 1159 ntBASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms