Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSN3P07498 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSN3P07498 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CSN3P07498 AL133380.1-201ENST00000506013 324 ntBASIC20.97■□□□□ 0.95
CSN3P07498 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.96■□□□□ 0.95
CSN3P07498 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.96■□□□□ 0.95
CSN3P07498 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSN3P07498 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.96■□□□□ 0.95
CSN3P07498 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.96■□□□□ 0.95
CSN3P07498 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSN3P07498 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSN3P07498 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.94■□□□□ 0.94
CSN3P07498 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSN3P07498 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSN3P07498 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSN3P07498 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSN3P07498 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.93■□□□□ 0.94
CSN3P07498 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.92■□□□□ 0.94
CSN3P07498 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSN3P07498 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.92■□□□□ 0.94
CSN3P07498 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.92■□□□□ 0.94
CSN3P07498 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSN3P07498 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSN3P07498 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.91■□□□□ 0.94
CSN3P07498 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.91■□□□□ 0.94
CSN3P07498 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.9■□□□□ 0.94
CSN3P07498 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSN3P07498 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSN3P07498 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSN3P07498 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.89■□□□□ 0.93
CSN3P07498 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSN3P07498 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSN3P07498 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSN3P07498 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSN3P07498 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSN3P07498 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.87■□□□□ 0.93
CSN3P07498 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSN3P07498 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CSN3P07498 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSN3P07498 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSN3P07498 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CSN3P07498 CAHM-201ENST00000604200 896 ntBASIC20.83■□□□□ 0.93
CSN3P07498 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSN3P07498 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSN3P07498 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSN3P07498 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.81■□□□□ 0.92
CSN3P07498 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSN3P07498 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSN3P07498 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSN3P07498 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSN3P07498 SUZ12P1-203ENST00000578195 985 ntBASIC20.8■□□□□ 0.92
CSN3P07498 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.8■□□□□ 0.92
CSN3P07498 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSN3P07498 AL391121.1-201ENST00000607967 1349 ntBASIC20.79■□□□□ 0.92
CSN3P07498 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSN3P07498 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSN3P07498 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.79■□□□□ 0.92
CSN3P07498 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.79■□□□□ 0.92
CSN3P07498 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSN3P07498 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSN3P07498 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSN3P07498 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSN3P07498 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSN3P07498 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSN3P07498 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSN3P07498 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.75■□□□□ 0.91
CSN3P07498 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSN3P07498 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSN3P07498 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
CSN3P07498 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSN3P07498 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSN3P07498 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CSN3P07498 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSN3P07498 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSN3P07498 WASH5P-204ENST00000632292 975 ntBASIC20.71■□□□□ 0.91
CSN3P07498 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSN3P07498 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSN3P07498 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.7■□□□□ 0.9
CSN3P07498 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSN3P07498 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CSN3P07498 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CSN3P07498 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSN3P07498 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.68■□□□□ 0.9
CSN3P07498 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSN3P07498 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSN3P07498 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSN3P07498 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSN3P07498 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSN3P07498 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.67■□□□□ 0.9
CSN3P07498 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSN3P07498 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSN3P07498 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSN3P07498 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CSN3P07498 AC120057.4-201ENST00000624722 1615 ntBASIC20.65■□□□□ 0.9
CSN3P07498 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.64■□□□□ 0.89
CSN3P07498 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSN3P07498 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSN3P07498 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSN3P07498 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.63■□□□□ 0.89
CSN3P07498 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms