Protein–RNA interactions for Protein: P04001

OPN1MW, Medium-wave-sensitive opsin 1, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1MWP04001 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
OPN1MWP04001 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
OPN1MWP04001 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
OPN1MWP04001 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
OPN1MWP04001 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.15■■□□□ 1.14
OPN1MWP04001 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
OPN1MWP04001 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
OPN1MWP04001 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
OPN1MWP04001 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.14■■□□□ 1.13
OPN1MWP04001 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
OPN1MWP04001 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
OPN1MWP04001 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPN1MWP04001 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPN1MWP04001 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPN1MWP04001 SETD8P1-201ENST00000623146 1180 ntBASIC22.11■■□□□ 1.13
OPN1MWP04001 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
OPN1MWP04001 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPN1MWP04001 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
OPN1MWP04001 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.1■■□□□ 1.13
OPN1MWP04001 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
OPN1MWP04001 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.09■■□□□ 1.13
OPN1MWP04001 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
OPN1MWP04001 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
OPN1MWP04001 AC136428.2-201ENST00000563187 214 ntBASIC22.08■■□□□ 1.13
OPN1MWP04001 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.08■■□□□ 1.13
OPN1MWP04001 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
OPN1MWP04001 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.08■■□□□ 1.12
OPN1MWP04001 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
OPN1MWP04001 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.06■■□□□ 1.12
OPN1MWP04001 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
OPN1MWP04001 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
OPN1MWP04001 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
OPN1MWP04001 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
OPN1MWP04001 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
OPN1MWP04001 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
OPN1MWP04001 AC120057.4-201ENST00000624722 1615 ntBASIC22.02■■□□□ 1.12
OPN1MWP04001 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
OPN1MWP04001 SUZ12P1-203ENST00000578195 985 ntBASIC22■■□□□ 1.11
OPN1MWP04001 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.99■■□□□ 1.11
OPN1MWP04001 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
OPN1MWP04001 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.99■■□□□ 1.11
OPN1MWP04001 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
OPN1MWP04001 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
OPN1MWP04001 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
OPN1MWP04001 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.98■■□□□ 1.11
OPN1MWP04001 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
OPN1MWP04001 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.97■■□□□ 1.11
OPN1MWP04001 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
OPN1MWP04001 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
OPN1MWP04001 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
OPN1MWP04001 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
OPN1MWP04001 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
OPN1MWP04001 AC139426.1-201ENST00000568218 2529 ntBASIC21.95■■□□□ 1.1
OPN1MWP04001 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.94■■□□□ 1.1
OPN1MWP04001 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
OPN1MWP04001 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.94■■□□□ 1.1
OPN1MWP04001 RPS2P35-201ENST00000443417 897 ntBASIC21.94■■□□□ 1.1
OPN1MWP04001 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.94■■□□□ 1.1
OPN1MWP04001 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
OPN1MWP04001 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
OPN1MWP04001 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
OPN1MWP04001 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OPN1MWP04001 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.91■■□□□ 1.1
OPN1MWP04001 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.91■■□□□ 1.1
OPN1MWP04001 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPN1MWP04001 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
OPN1MWP04001 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.9■■□□□ 1.1
OPN1MWP04001 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPN1MWP04001 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.88■■□□□ 1.09
OPN1MWP04001 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPN1MWP04001 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.88■■□□□ 1.09
OPN1MWP04001 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.88■■□□□ 1.09
OPN1MWP04001 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPN1MWP04001 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPN1MWP04001 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPN1MWP04001 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPN1MWP04001 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
OPN1MWP04001 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
OPN1MWP04001 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
OPN1MWP04001 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
OPN1MWP04001 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
OPN1MWP04001 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1MWP04001 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OPN1MWP04001 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
OPN1MWP04001 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
OPN1MWP04001 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OPN1MWP04001 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
OPN1MWP04001 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.8■■□□□ 1.08
OPN1MWP04001 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.79■■□□□ 1.08
OPN1MWP04001 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
OPN1MWP04001 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1MWP04001 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1MWP04001 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1MWP04001 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
OPN1MWP04001 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
OPN1MWP04001 ABCB10P1-201ENST00000614297 2181 ntBASIC21.77■■□□□ 1.07
OPN1MWP04001 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
OPN1MWP04001 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.76■■□□□ 1.07
OPN1MWP04001 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
OPN1MWP04001 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms