Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRB1P01911 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
HLA-DRB1P01911 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DRB1P01911 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
HLA-DRB1P01911 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRB1P01911 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRB1P01911 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DRB1P01911 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DRB1P01911 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
HLA-DRB1P01911 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
HLA-DRB1P01911 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HLA-DRB1P01911 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DRB1P01911 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRB1P01911 AC097358.2-201ENST00000607541 1159 ntBASIC21.56■■□□□ 1.04
HLA-DRB1P01911 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DRB1P01911 AC136428.2-201ENST00000563187 214 ntBASIC21.55■■□□□ 1.04
HLA-DRB1P01911 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DRB1P01911 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.54■■□□□ 1.04
HLA-DRB1P01911 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DRB1P01911 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRB1P01911 WASH5P-204ENST00000632292 975 ntBASIC21.53■■□□□ 1.04
HLA-DRB1P01911 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DRB1P01911 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DRB1P01911 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.52■■□□□ 1.04
HLA-DRB1P01911 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HLA-DRB1P01911 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DRB1P01911 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HLA-DRB1P01911 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRB1P01911 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRB1P01911 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DRB1P01911 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.49■■□□□ 1.03
HLA-DRB1P01911 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DRB1P01911 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRB1P01911 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRB1P01911 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
HLA-DRB1P01911 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HLA-DRB1P01911 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRB1P01911 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HLA-DRB1P01911 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
HLA-DRB1P01911 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.47■■□□□ 1.03
HLA-DRB1P01911 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DRB1P01911 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DRB1P01911 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DRB1P01911 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DRB1P01911 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRB1P01911 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DRB1P01911 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DRB1P01911 AL391121.1-201ENST00000607967 1349 ntBASIC21.44■■□□□ 1.02
HLA-DRB1P01911 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRB1P01911 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DRB1P01911 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRB1P01911 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRB1P01911 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRB1P01911 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.42■■□□□ 1.02
HLA-DRB1P01911 CAHM-201ENST00000604200 896 ntBASIC21.42■■□□□ 1.02
HLA-DRB1P01911 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRB1P01911 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRB1P01911 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DRB1P01911 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRB1P01911 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRB1P01911 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DRB1P01911 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DRB1P01911 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.39■■□□□ 1.01
HLA-DRB1P01911 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DRB1P01911 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.38■■□□□ 1.01
HLA-DRB1P01911 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRB1P01911 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRB1P01911 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRB1P01911 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.37■■□□□ 1.01
HLA-DRB1P01911 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRB1P01911 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
HLA-DRB1P01911 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DRB1P01911 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRB1P01911 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRB1P01911 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DRB1P01911 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRB1P01911 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRB1P01911 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DRB1P01911 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HLA-DRB1P01911 AL161658.1-201ENST00000623641 1967 ntBASIC21.32■■□□□ 1
HLA-DRB1P01911 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.31■■□□□ 1
HLA-DRB1P01911 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HLA-DRB1P01911 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DRB1P01911 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DRB1P01911 SUZ12P1-203ENST00000578195 985 ntBASIC21.3■■□□□ 1
HLA-DRB1P01911 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DRB1P01911 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.29■■□□□ 1
HLA-DRB1P01911 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DRB1P01911 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRB1P01911 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.28■■□□□ 1
HLA-DRB1P01911 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.28■■□□□ 1
HLA-DRB1P01911 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRB1P01911 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
HLA-DRB1P01911 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRB1P01911 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRB1P01911 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRB1P01911 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRB1P01911 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HLA-DRB1P01911 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRB1P01911 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms