Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
TIMP1P01033 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.36■■■□□ 2.45
TIMP1P01033 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TIMP1P01033 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TIMP1P01033 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.35■■■□□ 2.45
TIMP1P01033 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
TIMP1P01033 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
TIMP1P01033 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.33■■■□□ 2.45
TIMP1P01033 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TIMP1P01033 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TIMP1P01033 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.32■■■□□ 2.44
TIMP1P01033 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.32■■■□□ 2.44
TIMP1P01033 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TIMP1P01033 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TIMP1P01033 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TIMP1P01033 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.28■■■□□ 2.44
TIMP1P01033 WASH5P-204ENST00000632292 975 ntBASIC30.28■■■□□ 2.44
TIMP1P01033 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
TIMP1P01033 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TIMP1P01033 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TIMP1P01033 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.27■■■□□ 2.44
TIMP1P01033 DUX4L29-201ENST00000425409 679 ntBASIC30.26■■■□□ 2.43
TIMP1P01033 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TIMP1P01033 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.25■■■□□ 2.43
TIMP1P01033 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
TIMP1P01033 MIR4449-201ENST00000578365 66 ntBASIC30.24■■■□□ 2.43
TIMP1P01033 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
TIMP1P01033 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TIMP1P01033 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TIMP1P01033 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
TIMP1P01033 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TIMP1P01033 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.16■■■□□ 2.42
TIMP1P01033 MIR639-201ENST00000384974 98 ntBASIC30.16■■■□□ 2.42
TIMP1P01033 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TIMP1P01033 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TIMP1P01033 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TIMP1P01033 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
TIMP1P01033 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.12■■■□□ 2.41
TIMP1P01033 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TIMP1P01033 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TIMP1P01033 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.11■■■□□ 2.41
TIMP1P01033 AC021231.2-201ENST00000594613 730 ntBASIC30.1■■■□□ 2.41
TIMP1P01033 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TIMP1P01033 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.07■■■□□ 2.4
TIMP1P01033 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TIMP1P01033 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TIMP1P01033 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TIMP1P01033 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TIMP1P01033 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.04■■■□□ 2.4
TIMP1P01033 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.04■■■□□ 2.4
TIMP1P01033 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TIMP1P01033 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
TIMP1P01033 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
TIMP1P01033 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.01■■■□□ 2.39
TIMP1P01033 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30■■■□□ 2.39
TIMP1P01033 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TIMP1P01033 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
TIMP1P01033 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TIMP1P01033 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
TIMP1P01033 MIR3648-2-201ENST00000581792 180 ntBASIC29.98■■■□□ 2.39
TIMP1P01033 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.98■■■□□ 2.39
TIMP1P01033 MIR3648-1-201ENST00000615959 180 ntBASIC29.98■■■□□ 2.39
TIMP1P01033 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TIMP1P01033 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TIMP1P01033 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.97■■■□□ 2.39
TIMP1P01033 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TIMP1P01033 AC016575.1-201ENST00000607026 382 ntBASIC29.95■■■□□ 2.39
TIMP1P01033 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.95■■■□□ 2.39
TIMP1P01033 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TIMP1P01033 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.95■■■□□ 2.38
TIMP1P01033 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TIMP1P01033 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TIMP1P01033 HSD17B1P1-201ENST00000590052 955 ntBASIC29.92■■■□□ 2.38
TIMP1P01033 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.92■■■□□ 2.38
TIMP1P01033 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.91■■■□□ 2.38
TIMP1P01033 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
TIMP1P01033 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.89■■■□□ 2.38
TIMP1P01033 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.88■■■□□ 2.37
TIMP1P01033 AC108673.1-201ENST00000510422 1159 ntBASIC29.88■■■□□ 2.37
TIMP1P01033 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.87■■■□□ 2.37
TIMP1P01033 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
TIMP1P01033 MIR6090-201ENST00000622481 60 ntBASIC29.85■■■□□ 2.37
TIMP1P01033 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.85■■■□□ 2.37
TIMP1P01033 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TIMP1P01033 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TIMP1P01033 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
TIMP1P01033 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TIMP1P01033 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.82■■■□□ 2.36
TIMP1P01033 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
TIMP1P01033 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.81■■■□□ 2.36
TIMP1P01033 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.81■■■□□ 2.36
TIMP1P01033 DUX4L11-201ENST00000611504 1267 ntBASIC29.81■■■□□ 2.36
TIMP1P01033 DUX4L12-201ENST00000614593 1267 ntBASIC29.81■■■□□ 2.36
TIMP1P01033 DUX4L14-201ENST00000621227 1267 ntBASIC29.81■■■□□ 2.36
TIMP1P01033 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.81■■■□□ 2.36
TIMP1P01033 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
TIMP1P01033 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
TIMP1P01033 LINC01971-201ENST00000617888 1048 ntBASIC29.79■■■□□ 2.36
TIMP1P01033 CR559946.2-201ENST00000623684 991 ntBASIC29.79■■■□□ 2.36
TIMP1P01033 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms