Protein–RNA interactions for Protein: O96001

PPP1R17, Protein phosphatase 1 regulatory subunit 17, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R17O96001 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP1R17O96001 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R17O96001 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP1R17O96001 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R17O96001 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP1R17O96001 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R17O96001 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PPP1R17O96001 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPP1R17O96001 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP1R17O96001 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP1R17O96001 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP1R17O96001 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PPP1R17O96001 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP1R17O96001 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP1R17O96001 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PPP1R17O96001 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP1R17O96001 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PPP1R17O96001 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPP1R17O96001 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP1R17O96001 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PPP1R17O96001 AL161658.1-201ENST00000623641 1967 ntBASIC19.52■□□□□ 0.72
PPP1R17O96001 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PPP1R17O96001 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.51■□□□□ 0.71
PPP1R17O96001 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
PPP1R17O96001 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP1R17O96001 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPP1R17O96001 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP1R17O96001 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PPP1R17O96001 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP1R17O96001 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.46■□□□□ 0.71
PPP1R17O96001 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.45■□□□□ 0.7
PPP1R17O96001 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
PPP1R17O96001 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP1R17O96001 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PPP1R17O96001 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP1R17O96001 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PPP1R17O96001 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R17O96001 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R17O96001 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R17O96001 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PPP1R17O96001 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PPP1R17O96001 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R17O96001 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R17O96001 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R17O96001 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R17O96001 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PPP1R17O96001 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.41■□□□□ 0.7
PPP1R17O96001 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PPP1R17O96001 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R17O96001 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.4■□□□□ 0.7
PPP1R17O96001 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PPP1R17O96001 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R17O96001 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP1R17O96001 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PPP1R17O96001 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.39■□□□□ 0.69
PPP1R17O96001 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PPP1R17O96001 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R17O96001 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP1R17O96001 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R17O96001 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP1R17O96001 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP1R17O96001 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PPP1R17O96001 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R17O96001 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP1R17O96001 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PPP1R17O96001 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP1R17O96001 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R17O96001 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP1R17O96001 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R17O96001 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R17O96001 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP1R17O96001 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPP1R17O96001 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R17O96001 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP1R17O96001 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP1R17O96001 ST7-AS1-201ENST00000456775 1889 ntBASIC19.31■□□□□ 0.68
PPP1R17O96001 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP1R17O96001 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R17O96001 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP1R17O96001 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R17O96001 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R17O96001 AC139426.1-201ENST00000568218 2529 ntBASIC19.3■□□□□ 0.68
PPP1R17O96001 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R17O96001 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP1R17O96001 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.28■□□□□ 0.68
PPP1R17O96001 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PPP1R17O96001 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP1R17O96001 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPP1R17O96001 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R17O96001 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R17O96001 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP1R17O96001 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PPP1R17O96001 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP1R17O96001 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP1R17O96001 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PPP1R17O96001 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP1R17O96001 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R17O96001 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R17O96001 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R17O96001 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms