Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFPL3O75679 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.67■■□□□ 1.86
RFPL3O75679 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.67■■□□□ 1.86
RFPL3O75679 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.67■■□□□ 1.86
RFPL3O75679 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.66■■□□□ 1.86
RFPL3O75679 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RFPL3O75679 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.65■■□□□ 1.86
RFPL3O75679 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
RFPL3O75679 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RFPL3O75679 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.64■■□□□ 1.86
RFPL3O75679 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RFPL3O75679 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.62■■□□□ 1.85
RFPL3O75679 ZNRF2P2-203ENST00000454624 420 ntBASIC26.6■■□□□ 1.85
RFPL3O75679 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.59■■□□□ 1.85
RFPL3O75679 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFPL3O75679 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFPL3O75679 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
RFPL3O75679 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
RFPL3O75679 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFPL3O75679 WASH5P-204ENST00000632292 975 ntBASIC26.52■■□□□ 1.84
RFPL3O75679 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFPL3O75679 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.5■■□□□ 1.83
RFPL3O75679 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.5■■□□□ 1.83
RFPL3O75679 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RFPL3O75679 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFPL3O75679 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.49■■□□□ 1.83
RFPL3O75679 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFPL3O75679 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.49■■□□□ 1.83
RFPL3O75679 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RFPL3O75679 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.48■■□□□ 1.83
RFPL3O75679 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
RFPL3O75679 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RFPL3O75679 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RFPL3O75679 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RFPL3O75679 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RFPL3O75679 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.43■■□□□ 1.82
RFPL3O75679 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
RFPL3O75679 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RFPL3O75679 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.41■■□□□ 1.82
RFPL3O75679 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
RFPL3O75679 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RFPL3O75679 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.39■■□□□ 1.82
RFPL3O75679 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFPL3O75679 DUX4L29-201ENST00000425409 679 ntBASIC26.38■■□□□ 1.81
RFPL3O75679 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RFPL3O75679 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
RFPL3O75679 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RFPL3O75679 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL3O75679 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.36■■□□□ 1.81
RFPL3O75679 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFPL3O75679 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RFPL3O75679 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFPL3O75679 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFPL3O75679 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RFPL3O75679 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFPL3O75679 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL3O75679 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL3O75679 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.31■■□□□ 1.8
RFPL3O75679 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFPL3O75679 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFPL3O75679 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFPL3O75679 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.29■■□□□ 1.8
RFPL3O75679 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFPL3O75679 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFPL3O75679 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFPL3O75679 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.27■■□□□ 1.8
RFPL3O75679 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFPL3O75679 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.24■■□□□ 1.79
RFPL3O75679 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFPL3O75679 MIR4449-201ENST00000578365 66 ntBASIC26.23■■□□□ 1.79
RFPL3O75679 AC021231.2-201ENST00000594613 730 ntBASIC26.23■■□□□ 1.79
RFPL3O75679 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFPL3O75679 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.22■■□□□ 1.79
RFPL3O75679 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RFPL3O75679 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RFPL3O75679 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.21■■□□□ 1.79
RFPL3O75679 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RFPL3O75679 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RFPL3O75679 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.2■■□□□ 1.78
RFPL3O75679 MIR639-201ENST00000384974 98 ntBASIC26.19■■□□□ 1.78
RFPL3O75679 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RFPL3O75679 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RFPL3O75679 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFPL3O75679 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RFPL3O75679 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.16■■□□□ 1.78
RFPL3O75679 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RFPL3O75679 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
RFPL3O75679 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RFPL3O75679 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFPL3O75679 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.14■■□□□ 1.78
RFPL3O75679 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RFPL3O75679 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RFPL3O75679 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.13■■□□□ 1.77
RFPL3O75679 AC108673.1-201ENST00000510422 1159 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms