Protein–RNA interactions for Protein: O60721

SLC24A1, Sodium/potassium/calcium exchanger 1, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A1O60721 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
SLC24A1O60721 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
SLC24A1O60721 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
SLC24A1O60721 CHML-205ENST00000638160 705 ntTSL 3 BASIC37.93■■■■□ 3.66
SLC24A1O60721 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC37.92■■■■□ 3.66
SLC24A1O60721 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.92■■■■□ 3.66
SLC24A1O60721 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC37.91■■■■□ 3.66
SLC24A1O60721 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
SLC24A1O60721 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
SLC24A1O60721 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
SLC24A1O60721 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
SLC24A1O60721 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC37.88■■■■□ 3.65
SLC24A1O60721 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
SLC24A1O60721 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
SLC24A1O60721 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC37.86■■■■□ 3.65
SLC24A1O60721 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC37.86■■■■□ 3.65
SLC24A1O60721 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC37.86■■■■□ 3.65
SLC24A1O60721 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
SLC24A1O60721 AC120057.4-201ENST00000624722 1615 ntBASIC37.84■■■■□ 3.65
SLC24A1O60721 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
SLC24A1O60721 MIR762-201ENST00000390236 83 ntBASIC37.84■■■■□ 3.65
SLC24A1O60721 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC37.84■■■■□ 3.65
SLC24A1O60721 MIR3665-201ENST00000578708 105 ntBASIC37.83■■■■□ 3.65
SLC24A1O60721 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC37.81■■■■□ 3.64
SLC24A1O60721 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
SLC24A1O60721 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
SLC24A1O60721 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
SLC24A1O60721 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC37.78■■■■□ 3.64
SLC24A1O60721 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
SLC24A1O60721 NRG1-221ENST00000614767 762 ntTSL 5 BASIC37.76■■■■□ 3.64
SLC24A1O60721 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC37.75■■■■□ 3.63
SLC24A1O60721 AL162393.1-201ENST00000437852 946 ntBASIC37.75■■■■□ 3.63
SLC24A1O60721 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC37.74■■■■□ 3.63
SLC24A1O60721 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
SLC24A1O60721 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC37.72■■■■□ 3.63
SLC24A1O60721 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
SLC24A1O60721 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC37.7■■■■□ 3.63
SLC24A1O60721 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
SLC24A1O60721 AC005559.1-201ENST00000589661 871 ntBASIC37.7■■■■□ 3.63
SLC24A1O60721 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
SLC24A1O60721 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
SLC24A1O60721 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC37.67■■■■□ 3.62
SLC24A1O60721 RPS2P35-201ENST00000443417 897 ntBASIC37.67■■■■□ 3.62
SLC24A1O60721 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
SLC24A1O60721 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
SLC24A1O60721 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC37.61■■■■□ 3.61
SLC24A1O60721 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
SLC24A1O60721 DUX4L28-201ENST00000623687 678 ntBASIC37.61■■■■□ 3.61
SLC24A1O60721 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
SLC24A1O60721 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
SLC24A1O60721 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC37.6■■■■□ 3.61
SLC24A1O60721 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC37.6■■■■□ 3.61
SLC24A1O60721 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
SLC24A1O60721 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
SLC24A1O60721 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
SLC24A1O60721 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC37.56■■■■□ 3.6
SLC24A1O60721 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC37.55■■■■□ 3.6
SLC24A1O60721 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
SLC24A1O60721 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC37.54■■■■□ 3.6
SLC24A1O60721 AC087741.3-201ENST00000624270 1347 ntBASIC37.54■■■■□ 3.6
SLC24A1O60721 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
SLC24A1O60721 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
SLC24A1O60721 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC37.53■■■■□ 3.6
SLC24A1O60721 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC37.52■■■■□ 3.6
SLC24A1O60721 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
SLC24A1O60721 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
SLC24A1O60721 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC37.51■■■■□ 3.59
SLC24A1O60721 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC37.5■■■■□ 3.59
SLC24A1O60721 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
SLC24A1O60721 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
SLC24A1O60721 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
SLC24A1O60721 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC37.48■■■■□ 3.59
SLC24A1O60721 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
SLC24A1O60721 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
SLC24A1O60721 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
SLC24A1O60721 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC37.44■■■■□ 3.58
SLC24A1O60721 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC37.43■■■■□ 3.58
SLC24A1O60721 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
SLC24A1O60721 AC044849.2-201ENST00000606596 710 ntBASIC37.43■■■■□ 3.58
SLC24A1O60721 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC37.43■■■■□ 3.58
SLC24A1O60721 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
SLC24A1O60721 RPS2-209ENST00000529806 993 ntTSL 3 BASIC37.42■■■■□ 3.58
SLC24A1O60721 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC37.41■■■■□ 3.58
SLC24A1O60721 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC37.41■■■■□ 3.58
SLC24A1O60721 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC37.41■■■■□ 3.58
SLC24A1O60721 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC37.38■■■■□ 3.57
SLC24A1O60721 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC37.37■■■■□ 3.57
SLC24A1O60721 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
SLC24A1O60721 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
SLC24A1O60721 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
SLC24A1O60721 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
SLC24A1O60721 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
SLC24A1O60721 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.56
SLC24A1O60721 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC37.31■■■■□ 3.56
SLC24A1O60721 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC37.31■■■■□ 3.56
SLC24A1O60721 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
SLC24A1O60721 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC37.29■■■■□ 3.56
SLC24A1O60721 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
SLC24A1O60721 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC37.27■■■■□ 3.56
SLC24A1O60721 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC37.27■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms