Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
CTNND1O60716 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CTNND1O60716 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CTNND1O60716 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.24■■■□□ 2.75
CTNND1O60716 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CTNND1O60716 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CTNND1O60716 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CTNND1O60716 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.2■■■□□ 2.75
CTNND1O60716 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
CTNND1O60716 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.18■■■□□ 2.74
CTNND1O60716 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CTNND1O60716 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
CTNND1O60716 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
CTNND1O60716 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CTNND1O60716 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CTNND1O60716 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.16■■■□□ 2.74
CTNND1O60716 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CTNND1O60716 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CTNND1O60716 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.15■■■□□ 2.74
CTNND1O60716 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
CTNND1O60716 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.14■■■□□ 2.74
CTNND1O60716 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CTNND1O60716 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.14■■■□□ 2.74
CTNND1O60716 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.13■■■□□ 2.73
CTNND1O60716 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CTNND1O60716 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.09■■■□□ 2.73
CTNND1O60716 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CTNND1O60716 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CTNND1O60716 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.08■■■□□ 2.73
CTNND1O60716 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.08■■■□□ 2.73
CTNND1O60716 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CTNND1O60716 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.06■■■□□ 2.72
CTNND1O60716 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.06■■■□□ 2.72
CTNND1O60716 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.06■■■□□ 2.72
CTNND1O60716 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CTNND1O60716 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.04■■■□□ 2.72
CTNND1O60716 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CTNND1O60716 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CTNND1O60716 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CTNND1O60716 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CTNND1O60716 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CTNND1O60716 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CTNND1O60716 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CTNND1O60716 ZNRF2P2-203ENST00000454624 420 ntBASIC32.02■■■□□ 2.72
CTNND1O60716 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CTNND1O60716 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CTNND1O60716 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CTNND1O60716 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CTNND1O60716 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CTNND1O60716 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.99■■■□□ 2.71
CTNND1O60716 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CTNND1O60716 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CTNND1O60716 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.97■■■□□ 2.71
CTNND1O60716 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.96■■■□□ 2.71
CTNND1O60716 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.95■■■□□ 2.7
CTNND1O60716 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CTNND1O60716 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CTNND1O60716 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CTNND1O60716 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.93■■■□□ 2.7
CTNND1O60716 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.93■■■□□ 2.7
CTNND1O60716 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.92■■■□□ 2.7
CTNND1O60716 HLA-V-202ENST00000446817 847 ntBASIC31.92■■■□□ 2.7
CTNND1O60716 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CTNND1O60716 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CTNND1O60716 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CTNND1O60716 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.89■■■□□ 2.7
CTNND1O60716 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CTNND1O60716 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.88■■■□□ 2.69
CTNND1O60716 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.88■■■□□ 2.69
CTNND1O60716 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
CTNND1O60716 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.86■■■□□ 2.69
CTNND1O60716 DUX4L29-201ENST00000425409 679 ntBASIC31.86■■■□□ 2.69
CTNND1O60716 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CTNND1O60716 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CTNND1O60716 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CTNND1O60716 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.8■■■□□ 2.68
CTNND1O60716 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.8■■■□□ 2.68
CTNND1O60716 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.8■■■□□ 2.68
CTNND1O60716 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.79■■■□□ 2.68
CTNND1O60716 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CTNND1O60716 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.77■■■□□ 2.68
CTNND1O60716 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
CTNND1O60716 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CTNND1O60716 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CTNND1O60716 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CTNND1O60716 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.75■■■□□ 2.67
CTNND1O60716 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.75■■■□□ 2.67
CTNND1O60716 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
CTNND1O60716 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
CTNND1O60716 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CTNND1O60716 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CTNND1O60716 AC021231.2-201ENST00000594613 730 ntBASIC31.74■■■□□ 2.67
CTNND1O60716 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CTNND1O60716 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CTNND1O60716 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CTNND1O60716 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.73■■■□□ 2.67
CTNND1O60716 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CTNND1O60716 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.73■■■□□ 2.67
CTNND1O60716 AC108673.1-201ENST00000510422 1159 ntBASIC31.72■■■□□ 2.67
CTNND1O60716 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms