Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
XRCC2O43543 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
XRCC2O43543 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
XRCC2O43543 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRCC2O43543 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRCC2O43543 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRCC2O43543 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.47■■□□□ 1.35
XRCC2O43543 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.47■■□□□ 1.35
XRCC2O43543 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRCC2O43543 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
XRCC2O43543 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRCC2O43543 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
XRCC2O43543 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.44■■□□□ 1.34
XRCC2O43543 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
XRCC2O43543 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
XRCC2O43543 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
XRCC2O43543 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.43■■□□□ 1.34
XRCC2O43543 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
XRCC2O43543 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
XRCC2O43543 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
XRCC2O43543 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
XRCC2O43543 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.42■■□□□ 1.34
XRCC2O43543 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.42■■□□□ 1.34
XRCC2O43543 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
XRCC2O43543 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
XRCC2O43543 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
XRCC2O43543 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
XRCC2O43543 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.37■■□□□ 1.33
XRCC2O43543 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
XRCC2O43543 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.35■■□□□ 1.33
XRCC2O43543 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
XRCC2O43543 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
XRCC2O43543 AL133380.1-201ENST00000506013 324 ntBASIC23.34■■□□□ 1.33
XRCC2O43543 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
XRCC2O43543 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
XRCC2O43543 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.33■■□□□ 1.33
XRCC2O43543 RARRES2P7-201ENST00000567349 469 ntBASIC23.32■■□□□ 1.32
XRCC2O43543 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
XRCC2O43543 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
XRCC2O43543 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
XRCC2O43543 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
XRCC2O43543 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
XRCC2O43543 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.28■■□□□ 1.32
XRCC2O43543 WASH5P-204ENST00000632292 975 ntBASIC23.28■■□□□ 1.32
XRCC2O43543 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.27■■□□□ 1.32
XRCC2O43543 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
XRCC2O43543 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
XRCC2O43543 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
XRCC2O43543 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
XRCC2O43543 AL161658.1-201ENST00000623641 1967 ntBASIC23.25■■□□□ 1.31
XRCC2O43543 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
XRCC2O43543 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
XRCC2O43543 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
XRCC2O43543 SETD8P1-201ENST00000623146 1180 ntBASIC23.23■■□□□ 1.31
XRCC2O43543 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRCC2O43543 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
XRCC2O43543 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
XRCC2O43543 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRCC2O43543 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRCC2O43543 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
XRCC2O43543 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
XRCC2O43543 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
XRCC2O43543 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
XRCC2O43543 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
XRCC2O43543 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
XRCC2O43543 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
XRCC2O43543 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
XRCC2O43543 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
XRCC2O43543 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
XRCC2O43543 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
XRCC2O43543 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
XRCC2O43543 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
XRCC2O43543 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
XRCC2O43543 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.13■■□□□ 1.29
XRCC2O43543 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
XRCC2O43543 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
XRCC2O43543 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.12■■□□□ 1.29
XRCC2O43543 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
XRCC2O43543 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRCC2O43543 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRCC2O43543 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
XRCC2O43543 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
XRCC2O43543 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
XRCC2O43543 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
XRCC2O43543 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRCC2O43543 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.08■■□□□ 1.29
XRCC2O43543 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
XRCC2O43543 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.08■■□□□ 1.29
XRCC2O43543 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
XRCC2O43543 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRCC2O43543 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRCC2O43543 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
XRCC2O43543 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
XRCC2O43543 ABCB10P1-201ENST00000614297 2181 ntBASIC23.06■■□□□ 1.28
XRCC2O43543 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRCC2O43543 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
XRCC2O43543 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.05■■□□□ 1.28
XRCC2O43543 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRCC2O43543 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.04■■□□□ 1.28
XRCC2O43543 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms