Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.06■■□□□ 1.92
CDX4O14627 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDX4O14627 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.05■■□□□ 1.92
CDX4O14627 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDX4O14627 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.04■■□□□ 1.92
CDX4O14627 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDX4O14627 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDX4O14627 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDX4O14627 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDX4O14627 MIR4449-201ENST00000578365 66 ntBASIC27.01■■□□□ 1.91
CDX4O14627 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDX4O14627 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27■■□□□ 1.91
CDX4O14627 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27■■□□□ 1.91
CDX4O14627 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
CDX4O14627 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.99■■□□□ 1.91
CDX4O14627 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDX4O14627 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.97■■□□□ 1.91
CDX4O14627 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDX4O14627 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDX4O14627 DUX4L29-201ENST00000425409 679 ntBASIC26.96■■□□□ 1.91
CDX4O14627 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDX4O14627 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.95■■□□□ 1.9
CDX4O14627 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDX4O14627 WASH5P-204ENST00000632292 975 ntBASIC26.93■■□□□ 1.9
CDX4O14627 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
CDX4O14627 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDX4O14627 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.91■■□□□ 1.9
CDX4O14627 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDX4O14627 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDX4O14627 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.86■■□□□ 1.89
CDX4O14627 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.86■■□□□ 1.89
CDX4O14627 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDX4O14627 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDX4O14627 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.84■■□□□ 1.89
CDX4O14627 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDX4O14627 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.83■■□□□ 1.89
CDX4O14627 AC021231.2-201ENST00000594613 730 ntBASIC26.83■■□□□ 1.89
CDX4O14627 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.82■■□□□ 1.88
CDX4O14627 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDX4O14627 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CDX4O14627 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CDX4O14627 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDX4O14627 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.76■■□□□ 1.87
CDX4O14627 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDX4O14627 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDX4O14627 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.76■■□□□ 1.87
CDX4O14627 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDX4O14627 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDX4O14627 MIR3648-2-201ENST00000581792 180 ntBASIC26.74■■□□□ 1.87
CDX4O14627 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.74■■□□□ 1.87
CDX4O14627 MIR3648-1-201ENST00000615959 180 ntBASIC26.74■■□□□ 1.87
CDX4O14627 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CDX4O14627 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDX4O14627 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.73■■□□□ 1.87
CDX4O14627 HSD17B1P1-201ENST00000590052 955 ntBASIC26.73■■□□□ 1.87
CDX4O14627 AC016575.1-201ENST00000607026 382 ntBASIC26.73■■□□□ 1.87
CDX4O14627 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDX4O14627 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.72■■□□□ 1.87
CDX4O14627 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDX4O14627 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDX4O14627 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDX4O14627 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.71■■□□□ 1.87
CDX4O14627 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.71■■□□□ 1.87
CDX4O14627 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.7■■□□□ 1.86
CDX4O14627 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.68■■□□□ 1.86
CDX4O14627 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CDX4O14627 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDX4O14627 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.65■■□□□ 1.86
CDX4O14627 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDX4O14627 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.64■■□□□ 1.86
CDX4O14627 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CDX4O14627 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.64■■□□□ 1.86
CDX4O14627 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDX4O14627 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDX4O14627 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDX4O14627 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.61■■□□□ 1.85
CDX4O14627 MIR6090-201ENST00000622481 60 ntBASIC26.6■■□□□ 1.85
CDX4O14627 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDX4O14627 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDX4O14627 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CDX4O14627 AC108673.1-201ENST00000510422 1159 ntBASIC26.58■■□□□ 1.85
CDX4O14627 DUX4L11-201ENST00000611504 1267 ntBASIC26.58■■□□□ 1.85
CDX4O14627 DUX4L12-201ENST00000614593 1267 ntBASIC26.58■■□□□ 1.85
CDX4O14627 DUX4L14-201ENST00000621227 1267 ntBASIC26.58■■□□□ 1.85
CDX4O14627 CR559946.2-201ENST00000623684 991 ntBASIC26.58■■□□□ 1.85
CDX4O14627 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CDX4O14627 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDX4O14627 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.56■■□□□ 1.84
CDX4O14627 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.56■■□□□ 1.84
CDX4O14627 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.56■■□□□ 1.84
CDX4O14627 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDX4O14627 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CDX4O14627 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.54■■□□□ 1.84
CDX4O14627 LINC01971-201ENST00000617888 1048 ntBASIC26.54■■□□□ 1.84
CDX4O14627 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDX4O14627 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms