Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.06■■□□□ 1.92
CDX4O14627 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDX4O14627 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.05■■□□□ 1.92
CDX4O14627 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDX4O14627 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.04■■□□□ 1.92
CDX4O14627 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDX4O14627 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDX4O14627 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDX4O14627 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDX4O14627 MIR4449-201ENST00000578365 66 ntBASIC27.01■■□□□ 1.91
CDX4O14627 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDX4O14627 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27■■□□□ 1.91
CDX4O14627 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27■■□□□ 1.91
CDX4O14627 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
CDX4O14627 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.99■■□□□ 1.91
CDX4O14627 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDX4O14627 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.97■■□□□ 1.91
CDX4O14627 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDX4O14627 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDX4O14627 DUX4L29-201ENST00000425409 679 ntBASIC26.96■■□□□ 1.91
CDX4O14627 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDX4O14627 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.95■■□□□ 1.9
CDX4O14627 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDX4O14627 WASH5P-204ENST00000632292 975 ntBASIC26.93■■□□□ 1.9
CDX4O14627 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
CDX4O14627 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDX4O14627 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.91■■□□□ 1.9
CDX4O14627 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDX4O14627 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDX4O14627 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.86■■□□□ 1.89
CDX4O14627 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.86■■□□□ 1.89
CDX4O14627 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDX4O14627 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDX4O14627 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.84■■□□□ 1.89
CDX4O14627 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDX4O14627 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.83■■□□□ 1.89
CDX4O14627 AC021231.2-201ENST00000594613 730 ntBASIC26.83■■□□□ 1.89
CDX4O14627 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.82■■□□□ 1.88
CDX4O14627 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDX4O14627 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CDX4O14627 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CDX4O14627 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDX4O14627 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDX4O14627 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.76■■□□□ 1.87
CDX4O14627 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDX4O14627 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDX4O14627 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.76■■□□□ 1.87
CDX4O14627 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDX4O14627 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDX4O14627 MIR3648-2-201ENST00000581792 180 ntBASIC26.74■■□□□ 1.87
CDX4O14627 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.74■■□□□ 1.87
CDX4O14627 MIR3648-1-201ENST00000615959 180 ntBASIC26.74■■□□□ 1.87
CDX4O14627 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CDX4O14627 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDX4O14627 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.73■■□□□ 1.87
CDX4O14627 HSD17B1P1-201ENST00000590052 955 ntBASIC26.73■■□□□ 1.87
CDX4O14627 AC016575.1-201ENST00000607026 382 ntBASIC26.73■■□□□ 1.87
CDX4O14627 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDX4O14627 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.72■■□□□ 1.87
CDX4O14627 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDX4O14627 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDX4O14627 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDX4O14627 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.71■■□□□ 1.87
CDX4O14627 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.71■■□□□ 1.87
CDX4O14627 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.7■■□□□ 1.86
CDX4O14627 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.68■■□□□ 1.86
CDX4O14627 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CDX4O14627 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDX4O14627 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.65■■□□□ 1.86
CDX4O14627 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDX4O14627 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.64■■□□□ 1.86
CDX4O14627 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CDX4O14627 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.64■■□□□ 1.86
CDX4O14627 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDX4O14627 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDX4O14627 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CDX4O14627 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.61■■□□□ 1.85
CDX4O14627 MIR6090-201ENST00000622481 60 ntBASIC26.6■■□□□ 1.85
CDX4O14627 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDX4O14627 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDX4O14627 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CDX4O14627 AC108673.1-201ENST00000510422 1159 ntBASIC26.58■■□□□ 1.85
CDX4O14627 DUX4L11-201ENST00000611504 1267 ntBASIC26.58■■□□□ 1.85
CDX4O14627 DUX4L12-201ENST00000614593 1267 ntBASIC26.58■■□□□ 1.85
CDX4O14627 DUX4L14-201ENST00000621227 1267 ntBASIC26.58■■□□□ 1.85
CDX4O14627 CR559946.2-201ENST00000623684 991 ntBASIC26.58■■□□□ 1.85
CDX4O14627 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CDX4O14627 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDX4O14627 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.56■■□□□ 1.84
CDX4O14627 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.56■■□□□ 1.84
CDX4O14627 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.56■■□□□ 1.84
CDX4O14627 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDX4O14627 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CDX4O14627 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.54■■□□□ 1.84
CDX4O14627 LINC01971-201ENST00000617888 1048 ntBASIC26.54■■□□□ 1.84
CDX4O14627 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDX4O14627 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 1142.9 ms