Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBV7-9A0A0J9YWB2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV7-9A0A0J9YWB2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
TRBV7-9A0A0J9YWB2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV7-9A0A0J9YWB2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV7-9A0A0J9YWB2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV7-9A0A0J9YWB2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV7-9A0A0J9YWB2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV7-9A0A0J9YWB2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV7-9A0A0J9YWB2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV7-9A0A0J9YWB2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV7-9A0A0J9YWB2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TRBV7-9A0A0J9YWB2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV7-9A0A0J9YWB2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV7-9A0A0J9YWB2 AL031258.1-201ENST00000623562 325 ntBASIC20.1■□□□□ 0.81
TRBV7-9A0A0J9YWB2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRBV7-9A0A0J9YWB2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.09■□□□□ 0.81
TRBV7-9A0A0J9YWB2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV7-9A0A0J9YWB2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV7-9A0A0J9YWB2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV7-9A0A0J9YWB2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.07■□□□□ 0.8
TRBV7-9A0A0J9YWB2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRBV7-9A0A0J9YWB2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV7-9A0A0J9YWB2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV7-9A0A0J9YWB2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV7-9A0A0J9YWB2 AP002365.1-201ENST00000603448 772 ntBASIC20.03■□□□□ 0.8
TRBV7-9A0A0J9YWB2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV7-9A0A0J9YWB2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRBV7-9A0A0J9YWB2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV7-9A0A0J9YWB2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV7-9A0A0J9YWB2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV7-9A0A0J9YWB2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 ABCB10P1-201ENST00000614297 2181 ntBASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 AL161658.1-201ENST00000623641 1967 ntBASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV7-9A0A0J9YWB2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRBV7-9A0A0J9YWB2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV7-9A0A0J9YWB2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV7-9A0A0J9YWB2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRBV7-9A0A0J9YWB2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV7-9A0A0J9YWB2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRBV7-9A0A0J9YWB2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV7-9A0A0J9YWB2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
TRBV7-9A0A0J9YWB2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRBV7-9A0A0J9YWB2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV7-9A0A0J9YWB2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRBV7-9A0A0J9YWB2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV7-9A0A0J9YWB2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV7-9A0A0J9YWB2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV7-9A0A0J9YWB2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV7-9A0A0J9YWB2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
TRBV7-9A0A0J9YWB2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV7-9A0A0J9YWB2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TRBV7-9A0A0J9YWB2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV7-9A0A0J9YWB2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV7-9A0A0J9YWB2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV7-9A0A0J9YWB2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TRBV7-9A0A0J9YWB2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV7-9A0A0J9YWB2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV7-9A0A0J9YWB2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV7-9A0A0J9YWB2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRBV7-9A0A0J9YWB2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV7-9A0A0J9YWB2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV7-9A0A0J9YWB2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV7-9A0A0J9YWB2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV7-9A0A0J9YWB2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV7-9A0A0J9YWB2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ABCB10P3-201ENST00000561950 2166 ntBASIC19.88■□□□□ 0.77
TRBV7-9A0A0J9YWB2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV7-9A0A0J9YWB2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ST7-AS1-201ENST00000456775 1889 ntBASIC19.88■□□□□ 0.77
TRBV7-9A0A0J9YWB2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV7-9A0A0J9YWB2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV7-9A0A0J9YWB2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV7-9A0A0J9YWB2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV7-9A0A0J9YWB2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV7-9A0A0J9YWB2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRBV7-9A0A0J9YWB2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.85■□□□□ 0.77
TRBV7-9A0A0J9YWB2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV7-9A0A0J9YWB2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV7-9A0A0J9YWB2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV7-9A0A0J9YWB2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV7-9A0A0J9YWB2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV7-9A0A0J9YWB2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV7-9A0A0J9YWB2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV7-9A0A0J9YWB2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV7-9A0A0J9YWB2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRBV7-9A0A0J9YWB2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV7-9A0A0J9YWB2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV7-9A0A0J9YWB2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV7-9A0A0J9YWB2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV7-9A0A0J9YWB2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV7-9A0A0J9YWB2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms