Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 AC096631.2-201ENST00000436136 790 ntBASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 AC087239.1-201ENST00000622671 572 ntBASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 AC135279.3-201ENST00000610945 1311 ntBASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH18Q9HCL0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH18Q9HCL0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 AP005435.1-201ENST00000529293 1178 ntBASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH18Q9HCL0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDH18Q9HCL0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDH18Q9HCL0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDH18Q9HCL0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 BX842568.3-201ENST00000418104 571 ntBASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 OXCT2P1-201ENST00000447263 1535 ntBASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH18Q9HCL0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDH18Q9HCL0 OR7E47P-201ENST00000546390 1422 ntBASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 PBX2P1-201ENST00000493219 1291 ntBASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 AC110285.6-201ENST00000617652 491 ntBASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH18Q9HCL0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms