Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.17■■□□□ 1.14
PAF1Q8N7H5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.17■■□□□ 1.14
PAF1Q8N7H5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.17■■□□□ 1.14
PAF1Q8N7H5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PAF1Q8N7H5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PAF1Q8N7H5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PAF1Q8N7H5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 C9orf163-202ENST00000624034 2573 ntBASIC22.15■■□□□ 1.14
PAF1Q8N7H5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PAF1Q8N7H5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PAF1Q8N7H5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.14■■□□□ 1.14
PAF1Q8N7H5 TSPY26P-201ENST00000476365 1326 ntBASIC22.14■■□□□ 1.14
PAF1Q8N7H5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 LINC01960-201ENST00000563759 1884 ntBASIC22.14■■□□□ 1.13
PAF1Q8N7H5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PAF1Q8N7H5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PAF1Q8N7H5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 AC068587.7-201ENST00000641602 218 ntBASIC22.12■■□□□ 1.13
PAF1Q8N7H5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PAF1Q8N7H5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.11■■□□□ 1.13
PAF1Q8N7H5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.1■■□□□ 1.13
PAF1Q8N7H5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms