Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.072e-6■□□□□ 9.4
PHF6Q8IWS0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.192e-6■□□□□ 9.4
PHF6Q8IWS0 MAN2A2-230ENST00000561448 1443 ntTSL 213.62□□□□□ -0.232e-6■□□□□ 9.4
PHF6Q8IWS0 BRD2-212ENST00000482914 4834 ntTSL 1 (best)13.37□□□□□ -0.272e-6■□□□□ 9.4
PHF6Q8IWS0 DAZAP1-208ENST00000589874 3642 nt13.29□□□□□ -0.283e-11■□□□□ 9.4
PHF6Q8IWS0 MAN2A2-202ENST00000557865 2671 ntTSL 213.16□□□□□ -0.32e-6■□□□□ 9.4
PHF6Q8IWS0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.332e-6■□□□□ 9.4
PHF6Q8IWS0 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)12.95□□□□□ -0.342e-6■□□□□ 9.4
PHF6Q8IWS0 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.67□□□□□ -0.382e-6■□□□□ 9.4
PHF6Q8IWS0 DAZAP1-203ENST00000585485 3943 ntTSL 212.24□□□□□ -0.453e-11■□□□□ 9.4
PHF6Q8IWS0 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.692e-6■□□□□ 9.4
PHF6Q8IWS0 MAN2A2-219ENST00000560147 492 ntTSL 410.02□□□□□ -0.812e-6■□□□□ 9.4
PHF6Q8IWS0 MAN2A2-208ENST00000558538 576 ntTSL 48.73□□□□□ -1.012e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-205ENST00000472034 730 ntTSL 36.11□□□□□ -1.432e-6■□□□□ 9.4
PHF6Q8IWS0 LMNB1-208ENST00000504788 1801 ntTSL 25.13□□□□□ -1.592e-6■□□□□ 9.4
PHF6Q8IWS0 SNORD45B-201ENST00000364617 72 ntBASIC2.31□□□□□ -2.042e-33■□□□□ 9.4
PHF6Q8IWS0 PTTG1IP-206ENST00000480234 398 ntTSL 323.6■■□□□ 1.372e-7■□□□□ 9.4
PHF6Q8IWS0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.95■□□□□ 0.462e-7■□□□□ 9.4
PHF6Q8IWS0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.6■□□□□ 0.412e-7■□□□□ 9.4
PHF6Q8IWS0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-7■□□□□ 9.4
PHF6Q8IWS0 PTTG1IP-207ENST00000494690 612 ntTSL 513.41□□□□□ -0.262e-7■□□□□ 9.4
PHF6Q8IWS0 SNORD111B-201ENST00000408587 80 ntBASIC-1.19□□□□□ -2.66e-53■□□□□ 9.3
PHF6Q8IWS0 RTL10-204ENST00000416337 730 ntAPPRIS ALT2 TSL 222.6■■□□□ 1.213e-7■□□□□ 9.2
PHF6Q8IWS0 SNORD56-201ENST00000413522 71 ntBASIC4.49□□□□□ -1.691e-323■□□□□ 9.2
PHF6Q8IWS0 RABGGTB-204ENST00000461653 1702 ntTSL 57.75□□□□□ -1.171e-33■□□□□ 9.2
PHF6Q8IWS0 RABGGTB-211ENST00000489450 586 ntTSL 55.19□□□□□ -1.581e-33■□□□□ 9.2
PHF6Q8IWS0 NEAT1_1.1-201ENST00000620348 120 ntBASIC13.17□□□□□ -0.32e-25■□□□□ 9.1
PHF6Q8IWS0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.081e-9■□□□□ 9.1
PHF6Q8IWS0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.011e-9■□□□□ 9.1
PHF6Q8IWS0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.111e-9■□□□□ 9.1
PHF6Q8IWS0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.141e-9■□□□□ 9.1
PHF6Q8IWS0 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC12.18□□□□□ -0.461e-9■□□□□ 9.1
PHF6Q8IWS0 IGFL2-AS1-205ENST00000599817 340 ntTSL 211.89□□□□□ -0.511e-9■□□□□ 9.1
PHF6Q8IWS0 IGFL2-AS1-201ENST00000594027 294 ntTSL 311.21□□□□□ -0.611e-9■□□□□ 9.1
PHF6Q8IWS0 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -11e-9■□□□□ 9.1
PHF6Q8IWS0 TBRG4-214ENST00000488222 972 ntTSL 320.1■□□□□ 0.811e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-204ENST00000461363 856 ntTSL 216.85■□□□□ 0.291e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-213ENST00000484326 835 ntTSL 216.44■□□□□ 0.221e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.35■□□□□ 0.211e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.74■□□□□ 0.111e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.011e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.081e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-209ENST00000478532 945 ntTSL 514.35□□□□□ -0.111e-7■□□□□ 9.1
PHF6Q8IWS0 SNORA5C-201ENST00000364902 137 ntBASIC12.73□□□□□ -0.371e-7■□□□□ 9.1
PHF6Q8IWS0 TBRG4-217ENST00000495973 3409 ntTSL 1 (best)10.66□□□□□ -0.71e-7■□□□□ 9.1
PHF6Q8IWS0 SNORD1B-201ENST00000363091 84 ntBASIC0.32□□□□□ -2.363e-19■□□□□ 9
PHF6Q8IWS0 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.446e-15■□□□□ 9
PHF6Q8IWS0 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.586e-15■□□□□ 9
PHF6Q8IWS0 GNL3-211ENST00000496254 2118 ntTSL 55.38□□□□□ -1.556e-15■□□□□ 9
PHF6Q8IWS0 GNL3-209ENST00000484022 668 ntTSL 25.11□□□□□ -1.596e-15■□□□□ 9
PHF6Q8IWS0 ENO1-202ENST00000464920 2266 ntTSL 1 (best)12.46□□□□□ -0.422e-33■□□□□ 9
PHF6Q8IWS0 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.472e-33■□□□□ 9
PHF6Q8IWS0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.2■□□□□ 0.981e-6■□□□□ 9
PHF6Q8IWS0 PDLIM7-213ENST00000505074 931 ntTSL 319.91■□□□□ 0.781e-6■□□□□ 9
PHF6Q8IWS0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.611e-6■□□□□ 9
PHF6Q8IWS0 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)18.85■□□□□ 0.611e-6■□□□□ 9
PHF6Q8IWS0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.391e-6■□□□□ 9
PHF6Q8IWS0 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)17.23■□□□□ 0.351e-6■□□□□ 9
PHF6Q8IWS0 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.072e-60■□□□□ 8.9
PHF6Q8IWS0 SNORD94-201ENST00000386037 137 ntBASIC8.14□□□□□ -1.112e-60■□□□□ 8.9
PHF6Q8IWS0 PTCD3-216ENST00000487043 1054 ntTSL 35.6□□□□□ -1.512e-60■□□□□ 8.9
PHF6Q8IWS0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.611e-12■□□□□ 8.9
PHF6Q8IWS0 SNRPB-203ENST00000474384 985 ntTSL 519.19■□□□□ 0.669e-7■□□□□ 8.9
PHF6Q8IWS0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.469e-7■□□□□ 8.9
PHF6Q8IWS0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.359e-7■□□□□ 8.9
PHF6Q8IWS0 AGAP1-203ENST00000402604 563 ntTSL 415.7■□□□□ 0.19e-7■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.19■□□□□ 0.981e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.521e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.251e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.061e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.111e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.181e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-214ENST00000551123 1417 ntTSL 1 (best)12.81□□□□□ -0.361e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.671e-31■□□□□ 8.9
PHF6Q8IWS0 SLC25A3-204ENST00000546766 3236 ntTSL 1 (best)9.87□□□□□ -0.831e-31■□□□□ 8.9
PHF6Q8IWS0 SNORA53-201ENST00000391141 249 ntBASIC4.15□□□□□ -1.751e-31■□□□□ 8.9
PHF6Q8IWS0 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.83e-11■□□□□ 8.9
PHF6Q8IWS0 ZNF692-228ENST00000533976 527 ntTSL 430.64■■■□□ 2.52e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-217ENST00000495731 461 ntTSL 330.45■■■□□ 2.472e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-226ENST00000533647 548 ntTSL 325.34■■□□□ 1.652e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-225ENST00000533614 553 ntTSL 425.25■■□□□ 1.632e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-224ENST00000530986 595 ntTSL 424.23■■□□□ 1.472e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.342e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-220ENST00000496411 1064 ntTSL 323.43■■□□□ 1.342e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-212ENST00000478107 1051 ntTSL 523.32■■□□□ 1.322e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-219ENST00000496231 656 ntTSL 322.54■■□□□ 1.22e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-208ENST00000470787 1544 ntTSL 222.27■■□□□ 1.162e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-229ENST00000534456 587 ntTSL 422.07■■□□□ 1.122e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-203ENST00000412341 1916 ntTSL 521.64■■□□□ 1.052e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-218ENST00000496053 694 ntTSL 320.66■□□□□ 0.92e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-215ENST00000483791 681 ntTSL 320.6■□□□□ 0.892e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-221ENST00000497847 1031 ntTSL 220.6■□□□□ 0.892e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-214ENST00000483223 901 ntTSL 320.07■□□□□ 0.82e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.692e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-223ENST00000530699 896 ntTSL 1 (best)18.44■□□□□ 0.542e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.52e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-222ENST00000528141 576 ntTSL 417.87■□□□□ 0.452e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)14.8□□□□□ -0.042e-12■□□□□ 8.8
PHF6Q8IWS0 ZNF692-230ENST00000534660 552 ntTSL 314.8□□□□□ -0.042e-12■□□□□ 8.8
PHF6Q8IWS0 ATXN2-217ENST00000548492 556 ntTSL 48.03□□□□□ -1.122e-7■□□□□ 8.8
Retrieved 100 of 4,170 protein–RNA pairs in 69.5 ms