RNA–Protein interactions for RNA: ENST00000391141.1

SNORA53-201, Transcript of small nucleolar RNA, H/ACA box 53, humanhuman

BASIC

Gene SNORA53, Length 249 nt, Biotype snoRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA53-201ENST00000391141 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
SNORA53-201ENST00000391141 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
SNORA53-201ENST00000391141 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
SNORA53-201ENST00000391141 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
SNORA53-201ENST00000391141 FOXD1Q16676 465 aa14.14□□□□□ -0.15
SNORA53-201ENST00000391141 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
SNORA53-201ENST00000391141 MSH5O43196 834 aa13.34□□□□□ -0.27
SNORA53-201ENST00000391141 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
SNORA53-201ENST00000391141 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
SNORA53-201ENST00000391141 ADRA2BP18089 450 aa12.84□□□□□ -0.35
SNORA53-201ENST00000391141 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
SNORA53-201ENST00000391141 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
SNORA53-201ENST00000391141 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
SNORA53-201ENST00000391141 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
SNORA53-201ENST00000391141 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
SNORA53-201ENST00000391141 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
SNORA53-201ENST00000391141 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
SNORA53-201ENST00000391141 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
SNORA53-201ENST00000391141 PPP4R3CPQ6ZMV5 832 aa11.2□□□□□ -0.62
SNORA53-201ENST00000391141 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
SNORA53-201ENST00000391141 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
SNORA53-201ENST00000391141 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
SNORA53-201ENST00000391141 DNAJC5BQ9UF47 199 aa10.92□□□□□ -0.66
SNORA53-201ENST00000391141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNORA53-201ENST00000391141 POTEHQ6S545 545 aa10.72□□□□□ -0.69
SNORA53-201ENST00000391141 NCBP3Q53F19 620 aaKnown RBP10.58□□□□□ -0.72
SNORA53-201ENST00000391141 DSG3P32926 999 aa10.51□□□□□ -0.73
SNORA53-201ENST00000391141 NPM3O75607 178 aaKnown RBP10.5□□□□□ -0.73
SNORA53-201ENST00000391141 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
SNORA53-201ENST00000391141 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
SNORA53-201ENST00000391141 CAPN15O75808 1086 aa10.47□□□□□ -0.73
SNORA53-201ENST00000391141 ABCB7O75027 752 aa10.22□□□□□ -0.77
SNORA53-201ENST00000391141 TRHP20396 242 aaPredicted RBP10.21□□□□□ -0.77
SNORA53-201ENST00000391141 SLC4A2P04920 1241 aa10.15□□□□□ -0.78
SNORA53-201ENST00000391141 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
SNORA53-201ENST00000391141 KCNA4P22459 653 aa10.06□□□□□ -0.8
SNORA53-201ENST00000391141 APLP2Q06481 763 aa10.06□□□□□ -0.8
SNORA53-201ENST00000391141 RBM42Q9BTD8 480 aaKnown RBP9.99□□□□□ -0.81
SNORA53-201ENST00000391141 CHRDL2Q6WN34 429 aa9.98□□□□□ -0.81
SNORA53-201ENST00000391141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
SNORA53-201ENST00000391141 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
SNORA53-201ENST00000391141 SAMD1Q6SPF0 538 aaPredicted RBP9.92□□□□□ -0.82
SNORA53-201ENST00000391141 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
SNORA53-201ENST00000391141 POLA2Q14181 598 aa9.83□□□□□ -0.84
SNORA53-201ENST00000391141 MYCNP04198 464 aaPredicted RBP9.69□□□□□ -0.86
SNORA53-201ENST00000391141 AKT1S1Q96B36 256 aa9.68□□□□□ -0.86
SNORA53-201ENST00000391141 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
SNORA53-201ENST00000391141 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
SNORA53-201ENST00000391141 HAX1O00165 279 aa9.59□□□□□ -0.87
SNORA53-201ENST00000391141 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
SNORA53-201ENST00000391141 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
SNORA53-201ENST00000391141 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
SNORA53-201ENST00000391141 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNORA53-201ENST00000391141 ZBTB12Q9Y330 459 aaPredicted RBP9.53□□□□□ -0.88
SNORA53-201ENST00000391141 EVX2Q03828 476 aa9.5□□□□□ -0.89
SNORA53-201ENST00000391141 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
SNORA53-201ENST00000391141 FOXD4L1Q9NU39 408 aa9.36□□□□□ -0.91
SNORA53-201ENST00000391141 ZBTB22O15209 634 aa9.3□□□□□ -0.92
SNORA53-201ENST00000391141 PRKAR2AP13861 404 aaKnown RBP9.28□□□□□ -0.92
SNORA53-201ENST00000391141 C19orf67A6NJJ6 358 aa9.24□□□□□ -0.93
SNORA53-201ENST00000391141 LHX8Q68G74 356 aa9.23□□□□□ -0.93
SNORA53-201ENST00000391141 SPDYE2BA6NHP3 402 aa9.22□□□□□ -0.93
SNORA53-201ENST00000391141 GABBR2O75899 941 aa9.22□□□□□ -0.93
SNORA53-201ENST00000391141 SPDYE6P0CI01 402 aa9.22□□□□□ -0.93
SNORA53-201ENST00000391141 SPDYE2Q495Y8 402 aa9.22□□□□□ -0.93
SNORA53-201ENST00000391141 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
SNORA53-201ENST00000391141 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
SNORA53-201ENST00000391141 FBLN2P98095 1184 aa9.14□□□□□ -0.95
SNORA53-201ENST00000391141 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
SNORA53-201ENST00000391141 MKRN4PQ13434 485 aaPredicted RBP9.09□□□□□ -0.95
SNORA53-201ENST00000391141 SSUH2Q9Y2M2 353 aa9.08□□□□□ -0.96
SNORA53-201ENST00000391141 ATXN8OSP0DMR3 200 aa9.07□□□□□ -0.96
SNORA53-201ENST00000391141 ZNF692Q9BU19 519 aaPredicted RBP9.07□□□□□ -0.96
SNORA53-201ENST00000391141 POTEIP0CG38 1075 aa9.05□□□□□ -0.96
SNORA53-201ENST00000391141 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
SNORA53-201ENST00000391141 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
SNORA53-201ENST00000391141 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
SNORA53-201ENST00000391141 PABPN1Q86U42 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNORA53-201ENST00000391141 FARP1Q9Y4F1 1045 aaPredicted RBP8.9□□□□□ -0.98
SNORA53-201ENST00000391141 CSRNP3Q8WYN3 585 aa8.87□□□□□ -0.99
SNORA53-201ENST00000391141 DCBLD2Q96PD2 775 aa8.85□□□□□ -0.99
SNORA53-201ENST00000391141 CLCN6P51797 869 aa8.83□□□□□ -1
SNORA53-201ENST00000391141 ZNF579Q8NAF0 562 aaKnown RBP8.79□□□□□ -1
SNORA53-201ENST00000391141 OTUD5Q96G74 571 aa8.78□□□□□ -1
SNORA53-201ENST00000391141 ZRANB1Q9UGI0 708 aa8.77□□□□□ -1.01
SNORA53-201ENST00000391141 POTEB2H3BUK9 544 aa8.75□□□□□ -1.01
SNORA53-201ENST00000391141 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
SNORA53-201ENST00000391141 POTEMA6NI47 508 aa8.72□□□□□ -1.01
SNORA53-201ENST00000391141 CREBZFQ9NS37 354 aa8.69□□□□□ -1.02
SNORA53-201ENST00000391141 POTEGQ6S5H5 508 aa8.67□□□□□ -1.02
SNORA53-201ENST00000391141 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
SNORA53-201ENST00000391141 PELP1Q8IZL8 1130 aaKnown RBP8.63□□□□□ -1.03
SNORA53-201ENST00000391141 PHF12Q96QT6 1004 aa8.63□□□□□ -1.03
SNORA53-201ENST00000391141 PAK3O75914 559 aaPredicted RBP8.55□□□□□ -1.04
SNORA53-201ENST00000391141 POTEJP0CG39 1038 aa8.55□□□□□ -1.04
SNORA53-201ENST00000391141 STAG3Q9UJ98 1225 aa8.54□□□□□ -1.04
SNORA53-201ENST00000391141 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
SNORA53-201ENST00000391141 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
SNORA53-201ENST00000391141 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
SNORA53-201ENST00000391141 ASTLQ6HA08 431 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms