RNA–Protein interactions for RNA: ENST00000496254.5

GNL3-211, Transcript of G protein nucleolar 3, humanhuman

TSL 5

Gene GNL3, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-211ENST00000496254 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
GNL3-211ENST00000496254 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
GNL3-211ENST00000496254 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.41
GNL3-211ENST00000496254 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
GNL3-211ENST00000496254 NISCHQ9Y2I1 1504 aa12.02□□□□□ -0.49
GNL3-211ENST00000496254 FOXD1Q16676 465 aa11.65□□□□□ -0.55
GNL3-211ENST00000496254 PLPPR3Q6T4P5 718 aa11.23□□□□□ -0.61
GNL3-211ENST00000496254 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
GNL3-211ENST00000496254 MSH5O43196 834 aa10.89□□□□□ -0.67
GNL3-211ENST00000496254 ADRA2BP18089 450 aa10.88□□□□□ -0.67
GNL3-211ENST00000496254 PIAS4Q8N2W9 510 aaPredicted RBP10.85□□□□□ -0.67
GNL3-211ENST00000496254 POTEDQ86YR6 584 aa10.48□□□□□ -0.73
GNL3-211ENST00000496254 CCDC180Q9P1Z9 1646 aa10.39□□□□□ -0.75
GNL3-211ENST00000496254 ZCCHC6Q5VYS8 1495 aaKnown RBP10.17□□□□□ -0.78
GNL3-211ENST00000496254 SCAF1Q9H7N4 1312 aaKnown RBP10.01□□□□□ -0.81
GNL3-211ENST00000496254 SLC24A1O60721 1099 aa10□□□□□ -0.81
GNL3-211ENST00000496254 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
GNL3-211ENST00000496254 MAPK8IP2Q13387 824 aaPredicted RBP9.97□□□□□ -0.81
GNL3-211ENST00000496254 DCAF1Q9Y4B6 1507 aa9.96□□□□□ -0.82
GNL3-211ENST00000496254 DMRT2Q9Y5R5 561 aa9.95□□□□□ -0.82
GNL3-211ENST00000496254 PPP4R3CPQ6ZMV5 832 aa9.85□□□□□ -0.83
GNL3-211ENST00000496254 DCAF8L2P0C7V8 631 aa9.8□□□□□ -0.84
GNL3-211ENST00000496254 ABCC9O60706 1549 aa9.77□□□□□ -0.85
GNL3-211ENST00000496254 SUPT5HO00267 1087 aaKnown RBP9.74□□□□□ -0.85
GNL3-211ENST00000496254 MYO15BQ96JP2 1530 aa9.74□□□□□ -0.85
GNL3-211ENST00000496254 CNKSR2Q8WXI2 1034 aa9.67□□□□□ -0.86
GNL3-211ENST00000496254 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
GNL3-211ENST00000496254 NACADO15069 1562 aa9.59□□□□□ -0.87
GNL3-211ENST00000496254 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
GNL3-211ENST00000496254 RNF216Q9NWF9 866 aaPredicted RBP9.56□□□□□ -0.88
GNL3-211ENST00000496254 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
GNL3-211ENST00000496254 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
GNL3-211ENST00000496254 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
GNL3-211ENST00000496254 DCAF8L1A6NGE4 600 aa9.41□□□□□ -0.9
GNL3-211ENST00000496254 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
GNL3-211ENST00000496254 NPM3O75607 178 aaKnown RBP9.34□□□□□ -0.91
GNL3-211ENST00000496254 RNF39Q9H2S5 420 aa9.29□□□□□ -0.92
GNL3-211ENST00000496254 EHMT2Q96KQ7 1210 aa9.29□□□□□ -0.92
GNL3-211ENST00000496254 CECR2Q9BXF3 1484 aa9.28□□□□□ -0.92
GNL3-211ENST00000496254 MROH2BQ7Z745 1585 aa9.28□□□□□ -0.92
GNL3-211ENST00000496254 BAZ1AQ9NRL2 1556 aaPredicted RBP9.28□□□□□ -0.92
GNL3-211ENST00000496254 UNC13AQ9UPW8 1703 aa9.26□□□□□ -0.93
GNL3-211ENST00000496254 CACNB1Q02641 598 aaPredicted RBP9.26□□□□□ -0.93
GNL3-211ENST00000496254 WIZO95785 1651 aa9.23□□□□□ -0.93
GNL3-211ENST00000496254 HRCP23327 699 aa9.23□□□□□ -0.93
GNL3-211ENST00000496254 SMARCA4P51532 1647 aa9.19□□□□□ -0.94
GNL3-211ENST00000496254 KCNA4P22459 653 aa9.19□□□□□ -0.94
GNL3-211ENST00000496254 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
GNL3-211ENST00000496254 TOP2AP11388 1531 aaKnown RBP9.16□□□□□ -0.94
GNL3-211ENST00000496254 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
GNL3-211ENST00000496254 EIF4G1Q04637 1599 aaKnown RBP9.12□□□□□ -0.95
GNL3-211ENST00000496254 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
GNL3-211ENST00000496254 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
GNL3-211ENST00000496254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.1□□□□□ -0.956e-8■■■□□ 18.5
GNL3-211ENST00000496254 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
GNL3-211ENST00000496254 SMARCA2P51531 1590 aa9.07□□□□□ -0.96
GNL3-211ENST00000496254 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
GNL3-211ENST00000496254 DAXXQ9UER7 740 aaPredicted RBP9.04□□□□□ -0.96
GNL3-211ENST00000496254 CCDC88BA6NC98 1476 aa9.04□□□□□ -0.96
GNL3-211ENST00000496254 RTN4Q9NQC3 1192 aaKnown RBP9.02□□□□□ -0.96
GNL3-211ENST00000496254 PCGF6Q9BYE7 350 aa9.01□□□□□ -0.97
GNL3-211ENST00000496254 FAM9AQ8IZU1 332 aaPredicted RBP8.97□□□□□ -0.97
GNL3-211ENST00000496254 TRIM26Q12899 539 aaPredicted RBP8.96□□□□□ -0.98
GNL3-211ENST00000496254 ABCC8Q09428 1581 aa8.96□□□□□ -0.98
GNL3-211ENST00000496254 ATAD2BQ9ULI0 1458 aa8.95□□□□□ -0.98
GNL3-211ENST00000496254 U3KPZ7 1027 aaPredicted RBP8.95□□□□□ -0.98
GNL3-211ENST00000496254 BAZ1BQ9UIG0 1483 aaKnown RBP8.94□□□□□ -0.98
GNL3-211ENST00000496254 EEA1Q15075 1411 aa8.92□□□□□ -0.98
GNL3-211ENST00000496254 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
GNL3-211ENST00000496254 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
GNL3-211ENST00000496254 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
GNL3-211ENST00000496254 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
GNL3-211ENST00000496254 HMGXB3Q12766 1538 aa8.87□□□□□ -0.99
GNL3-211ENST00000496254 CC2D2AQ9P2K1 1620 aa8.84□□□□□ -0.99
GNL3-211ENST00000496254 SOGA1O94964 1423 aa8.83□□□□□ -1
GNL3-211ENST00000496254 NCAPD3P42695 1498 aa8.83□□□□□ -1
GNL3-211ENST00000496254 SYNJ1O43426 1573 aa8.83□□□□□ -1
GNL3-211ENST00000496254 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
GNL3-211ENST00000496254 GOLGA3Q08378 1498 aa8.81□□□□□ -1
GNL3-211ENST00000496254 DNAJC5Q9H3Z4 198 aa8.8□□□□□ -1
GNL3-211ENST00000496254 CSRNP3Q8WYN3 585 aa8.8□□□□□ -1
GNL3-211ENST00000496254 CEP162Q5TB80 1403 aa8.79□□□□□ -1
GNL3-211ENST00000496254 ZEB1P37275 1124 aaPredicted RBP8.79□□□□□ -1
GNL3-211ENST00000496254 KIF21BO75037 1637 aa8.79□□□□□ -1
GNL3-211ENST00000496254 CEP164Q9UPV0 1460 aa8.78□□□□□ -1
GNL3-211ENST00000496254 TOP2BQ02880 1626 aa8.78□□□□□ -1
GNL3-211ENST00000496254 BIVM-ERCC5R4GMW8 1640 aa8.78□□□□□ -1
GNL3-211ENST00000496254 RUSC2Q8N2Y8 1516 aa8.76□□□□□ -1.01
GNL3-211ENST00000496254 SPINK5Q9NQ38 1064 aaPredicted RBP8.76□□□□□ -1.01
GNL3-211ENST00000496254 APLP2Q06481 763 aa8.74□□□□□ -1.01
GNL3-211ENST00000496254 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
GNL3-211ENST00000496254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.74□□□□□ -1.01
GNL3-211ENST00000496254 HNRNPUL2Q1KMD3 747 aaKnown RBP8.74□□□□□ -1.01
GNL3-211ENST00000496254 CAPN15O75808 1086 aa8.73□□□□□ -1.01
GNL3-211ENST00000496254 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
GNL3-211ENST00000496254 CFTRP13569 1480 aa8.72□□□□□ -1.01
GNL3-211ENST00000496254 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
GNL3-211ENST00000496254 DSG3P32926 999 aa8.72□□□□□ -1.01
GNL3-211ENST00000496254 SLC4A1APQ9BWU0 796 aaKnown RBP8.7□□□□□ -1.02
GNL3-211ENST00000496254 ERICH3Q5RHP9 1530 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms