Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB1Q86U70 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB1Q86U70 C11orf96-202ENST00000528572 1834 ntBASIC21.67■■□□□ 1.06
LDB1Q86U70 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LDB1Q86U70 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.67■■□□□ 1.06
LDB1Q86U70 SLC47A1P1-202ENST00000449666 945 ntBASIC21.67■■□□□ 1.06
LDB1Q86U70 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.67■■□□□ 1.06
LDB1Q86U70 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB1Q86U70 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB1Q86U70 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LDB1Q86U70 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.67■■□□□ 1.06
LDB1Q86U70 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LDB1Q86U70 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.67■■□□□ 1.06
LDB1Q86U70 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.66■■□□□ 1.06
LDB1Q86U70 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LDB1Q86U70 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.66■■□□□ 1.06
LDB1Q86U70 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.66■■□□□ 1.06
LDB1Q86U70 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LDB1Q86U70 AC024257.2-201ENST00000549699 147 ntBASIC21.66■■□□□ 1.06
LDB1Q86U70 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
LDB1Q86U70 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
LDB1Q86U70 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.65■■□□□ 1.06
LDB1Q86U70 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.65■■□□□ 1.06
LDB1Q86U70 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
LDB1Q86U70 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LDB1Q86U70 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 AC096631.2-201ENST00000436136 790 ntBASIC21.65■■□□□ 1.06
LDB1Q86U70 MIR4767-201ENST00000582827 78 ntBASIC21.65■■□□□ 1.06
LDB1Q86U70 AL136162.1-201ENST00000607711 1078 ntBASIC21.65■■□□□ 1.06
LDB1Q86U70 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.65■■□□□ 1.06
LDB1Q86U70 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
LDB1Q86U70 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB1Q86U70 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LDB1Q86U70 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LDB1Q86U70 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LDB1Q86U70 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.64■■□□□ 1.06
LDB1Q86U70 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
LDB1Q86U70 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.64■■□□□ 1.06
LDB1Q86U70 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LDB1Q86U70 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.64■■□□□ 1.05
LDB1Q86U70 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.64■■□□□ 1.05
LDB1Q86U70 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LDB1Q86U70 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.64■■□□□ 1.05
LDB1Q86U70 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LDB1Q86U70 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB1Q86U70 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.63■■□□□ 1.05
LDB1Q86U70 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LDB1Q86U70 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LDB1Q86U70 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB1Q86U70 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.63■■□□□ 1.05
LDB1Q86U70 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB1Q86U70 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB1Q86U70 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB1Q86U70 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB1Q86U70 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LDB1Q86U70 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB1Q86U70 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB1Q86U70 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LDB1Q86U70 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
LDB1Q86U70 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB1Q86U70 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.62■■□□□ 1.05
LDB1Q86U70 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.61■■□□□ 1.05
LDB1Q86U70 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.61■■□□□ 1.05
LDB1Q86U70 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.61■■□□□ 1.05
LDB1Q86U70 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.61■■□□□ 1.05
LDB1Q86U70 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.61■■□□□ 1.05
LDB1Q86U70 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.61■■□□□ 1.05
LDB1Q86U70 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LDB1Q86U70 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LDB1Q86U70 FBXW4P1-201ENST00000426721 2239 ntBASIC21.6■■□□□ 1.05
LDB1Q86U70 AC135279.3-201ENST00000610945 1311 ntBASIC21.6■■□□□ 1.05
LDB1Q86U70 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LDB1Q86U70 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.6■■□□□ 1.05
LDB1Q86U70 AC079089.2-201ENST00000531211 1277 ntBASIC21.6■■□□□ 1.05
LDB1Q86U70 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.6■■□□□ 1.05
LDB1Q86U70 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LDB1Q86U70 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LDB1Q86U70 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.59■■□□□ 1.05
LDB1Q86U70 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LDB1Q86U70 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LDB1Q86U70 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LDB1Q86U70 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LDB1Q86U70 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.59■■□□□ 1.05
LDB1Q86U70 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.59■■□□□ 1.05
LDB1Q86U70 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LDB1Q86U70 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LDB1Q86U70 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LDB1Q86U70 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LDB1Q86U70 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms