Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CD63-211ENST00000551173 788 ntTSL 317.02■□□□□ 0.321e-18■■■■□ 21.7
LARP4Q71RC2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.582e-8■■■■□ 21.7
LARP4Q71RC2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.01■□□□□ 0.312e-8■■■■□ 21.7
LARP4Q71RC2 NUBP2-207ENST00000565603 995 ntTSL 317.83■□□□□ 0.449e-6■■■■□ 21.7
LARP4Q71RC2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.36□□□□□ -0.119e-6■■■■□ 21.7
LARP4Q71RC2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.335e-6■■■■□ 21.7
LARP4Q71RC2 NSMCE1-208ENST00000565070 1853 ntTSL 512.42□□□□□ -0.425e-6■■■■□ 21.7
LARP4Q71RC2 NSMCE1-214ENST00000569236 1782 ntTSL 211.91□□□□□ -0.55e-6■■■■□ 21.7
LARP4Q71RC2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.33■□□□□ 0.525e-8■■■■□ 21.7
LARP4Q71RC2 NDUFV3-203ENST00000460259 2029 ntTSL 214.53□□□□□ -0.085e-8■■■■□ 21.7
LARP4Q71RC2 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.955e-8■■■■□ 21.7
LARP4Q71RC2 ARPC2-212ENST00000477992 2221 ntTSL 210.49□□□□□ -0.734e-9■■■■□ 21.6
LARP4Q71RC2 ARPC2-209ENST00000470146 2226 ntTSL 210.38□□□□□ -0.754e-9■■■■□ 21.6
LARP4Q71RC2 ARPC2-206ENST00000456575 644 ntTSL 37.02□□□□□ -1.294e-9■■■■□ 21.6
LARP4Q71RC2 ARPC2-216ENST00000487321 550 ntTSL 25.76□□□□□ -1.494e-9■■■■□ 21.6
LARP4Q71RC2 AC106744.1-201ENST00000504827 660 ntTSL 3 BASIC10.04□□□□□ -0.81e-6■■■■□ 21.6
LARP4Q71RC2 MRPL11-205ENST00000528272 506 ntTSL 35.49□□□□□ -1.532e-8■■■■□ 21.6
LARP4Q71RC2 NUBP2-211ENST00000567700 2196 ntTSL 220.3■□□□□ 0.849e-6■■■■□ 21.6
LARP4Q71RC2 NUBP2-215ENST00000568834 1173 ntTSL 218.75■□□□□ 0.599e-6■■■■□ 21.6
LARP4Q71RC2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.479e-6■■■■□ 21.6
LARP4Q71RC2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.56■□□□□ 0.089e-6■■■■□ 21.6
LARP4Q71RC2 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC8.24□□□□□ -1.099e-7■■■■□ 21.6
LARP4Q71RC2 RPL13-206ENST00000472354 631 ntTSL 310.53□□□□□ -0.723e-18■■■■□ 21.6
LARP4Q71RC2 RPL13-215ENST00000570149 435 ntTSL 210.37□□□□□ -0.751e-7■■■■□ 21.6
LARP4Q71RC2 GRINA-209ENST00000533377 627 ntTSL 214.03□□□□□ -0.162e-8■■■■□ 21.6
LARP4Q71RC2 NMU-206ENST00000515325 616 ntTSL 36.05□□□□□ -1.444e-7■■■■□ 21.6
LARP4Q71RC2 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.443e-6■■■■□ 21.5
LARP4Q71RC2 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.693e-6■■■■□ 21.5
LARP4Q71RC2 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.763e-6■■■■□ 21.5
LARP4Q71RC2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.73■□□□□ 0.915e-10■■■■□ 21.5
LARP4Q71RC2 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)17.44■□□□□ 0.385e-10■■■■□ 21.5
LARP4Q71RC2 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.91□□□□□ -1.145e-10■■■■□ 21.5
LARP4Q71RC2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.319e-6■■■■□ 21.5
LARP4Q71RC2 MRPL36-205ENST00000510999 793 ntTSL 323.7■■□□□ 1.389e-6■■■■□ 21.5
LARP4Q71RC2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.049e-6■■■■□ 21.5
LARP4Q71RC2 C1orf35-203ENST00000469781 2256 ntTSL 221.01■□□□□ 0.959e-6■■■■□ 21.5
LARP4Q71RC2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.9■□□□□ 0.789e-6■■■■□ 21.5
LARP4Q71RC2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.41■□□□□ 0.79e-6■■■■□ 21.5
LARP4Q71RC2 GSTM4-212ENST00000495742 1159 ntTSL 1 (best)19.27■□□□□ 0.689e-11■■■■□ 21.5
LARP4Q71RC2 C1orf35-205ENST00000485896 1429 ntTSL 219.17■□□□□ 0.669e-6■■■■□ 21.5
LARP4Q71RC2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.539e-6■■■■□ 21.5
LARP4Q71RC2 YIPF3-204ENST00000455768 843 ntTSL 518.35■□□□□ 0.539e-6■■■■□ 21.5
LARP4Q71RC2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.09■□□□□ 0.499e-6■■■■□ 21.5
LARP4Q71RC2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.479e-6■■■■□ 21.5
LARP4Q71RC2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.439e-6■■■■□ 21.5
LARP4Q71RC2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.429e-6■■■■□ 21.5
LARP4Q71RC2 ZDHHC12-204ENST00000452105 644 ntTSL 217.65■□□□□ 0.429e-6■■■■□ 21.5
LARP4Q71RC2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.349e-6■■■■□ 21.5
LARP4Q71RC2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.39e-6■■■■□ 21.5
LARP4Q71RC2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.39e-6■■■■□ 21.5
LARP4Q71RC2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.289e-11■■■■□ 21.5
LARP4Q71RC2 YIPF3-205ENST00000460547 1674 ntTSL 1 (best)16.7■□□□□ 0.269e-6■■■■□ 21.5
LARP4Q71RC2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.259e-6■■■■□ 21.5
LARP4Q71RC2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.38■□□□□ 0.219e-6■■■■□ 21.5
LARP4Q71RC2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.159e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.119e-6■■■■□ 21.5
LARP4Q71RC2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.52■□□□□ 0.089e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.039e-6■■■■□ 21.5
LARP4Q71RC2 DGAT2-206ENST00000604733 885 ntTSL 1 (best)15.26■□□□□ 0.039e-6■■■■□ 21.5
LARP4Q71RC2 YIPF3-212ENST00000503972 933 ntTSL 514.78□□□□□ -0.049e-6■■■■□ 21.5
LARP4Q71RC2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.059e-6■■■■□ 21.5
LARP4Q71RC2 RNASEH2A-204ENST00000593017 1487 ntTSL 214.76□□□□□ -0.059e-6■■■■□ 21.5
LARP4Q71RC2 LRP3-203ENST00000590278 3278 ntTSL 214.7□□□□□ -0.069e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.089e-6■■■■□ 21.5
LARP4Q71RC2 AC008738.7-201ENST00000609744 511 ntBASIC14.54□□□□□ -0.089e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.089e-6■■■■□ 21.5
LARP4Q71RC2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.129e-6■■■■□ 21.5
LARP4Q71RC2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.159e-11■■■■□ 21.5
LARP4Q71RC2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.169e-6■■■■□ 21.5
LARP4Q71RC2 C1orf35-204ENST00000472617 3554 ntTSL 213.94□□□□□ -0.189e-6■■■■□ 21.5
LARP4Q71RC2 COMMD4-205ENST00000562310 568 ntTSL 313.85□□□□□ -0.199e-6■■■■□ 21.5
LARP4Q71RC2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.29e-6■■■■□ 21.5
LARP4Q71RC2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.29e-6■■■■□ 21.5
LARP4Q71RC2 COMMD4-223ENST00000568301 666 ntTSL 513.61□□□□□ -0.239e-6■■■■□ 21.5
LARP4Q71RC2 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.239e-11■■■■□ 21.5
LARP4Q71RC2 YIPF3-206ENST00000460903 605 ntTSL 213.48□□□□□ -0.259e-6■■■■□ 21.5
LARP4Q71RC2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.269e-6■■■■□ 21.5
LARP4Q71RC2 MAP3K4-215ENST00000544041 5444 ntTSL 1 (best)13.23□□□□□ -0.299e-6■■■■□ 21.5
LARP4Q71RC2 MAP3K4-207ENST00000490904 5451 ntTSL 1 (best)13.16□□□□□ -0.39e-6■■■■□ 21.5
LARP4Q71RC2 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.319e-6■■■■□ 21.5
LARP4Q71RC2 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.319e-6■■■■□ 21.5
LARP4Q71RC2 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.329e-6■■■■□ 21.5
LARP4Q71RC2 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.98□□□□□ -0.339e-6■■■■□ 21.5
LARP4Q71RC2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.69□□□□□ -0.389e-11■■■■□ 21.5
LARP4Q71RC2 RTEL1-206ENST00000425905 664 ntTSL 212.22□□□□□ -0.459e-6■■■■□ 21.5
LARP4Q71RC2 YIPF3-203ENST00000416380 1005 ntTSL 511.89□□□□□ -0.519e-6■■■■□ 21.5
LARP4Q71RC2 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC11.62□□□□□ -0.559e-11■■■■□ 21.5
LARP4Q71RC2 MAP3K4-208ENST00000536852 2526 ntTSL 211.52□□□□□ -0.579e-6■■■■□ 21.5
LARP4Q71RC2 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.69e-6■■■■□ 21.5
LARP4Q71RC2 YIPF3-210ENST00000502714 795 ntTSL 411.22□□□□□ -0.619e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-210ENST00000497815 947 ntTSL 211.19□□□□□ -0.629e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC11□□□□□ -0.659e-6■■■■□ 21.5
LARP4Q71RC2 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC10.95□□□□□ -0.669e-11■■■■□ 21.5
LARP4Q71RC2 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.669e-11■■■■□ 21.5
LARP4Q71RC2 DGAT2-205ENST00000603865 2678 ntTSL 210.73□□□□□ -0.699e-6■■■■□ 21.5
LARP4Q71RC2 SEC24C-203ENST00000465076 4668 ntTSL 1 (best)10.68□□□□□ -0.79e-6■■■■□ 21.5
LARP4Q71RC2 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.769e-6■■■■□ 21.5
LARP4Q71RC2 GSTM4-211ENST00000493395 913 ntTSL 39.78□□□□□ -0.849e-11■■■■□ 21.5
LARP4Q71RC2 YIPF3-215ENST00000511831 566 ntTSL 49.21□□□□□ -0.949e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.949e-6■■■■□ 21.5
Retrieved 100 of 15,922 protein–RNA pairs in 148.4 ms