Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB5BP61020 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB5BP61020 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB5BP61020 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB5BP61020 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB5BP61020 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB5BP61020 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB5BP61020 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB5BP61020 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAB5BP61020 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB5BP61020 AC079630.1-202ENST00000618127 1840 ntBASIC17.03■□□□□ 0.32
RAB5BP61020 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB5BP61020 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5BP61020 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAB5BP61020 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5BP61020 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB5BP61020 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB5BP61020 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB5BP61020 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RAB5BP61020 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB5BP61020 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB5BP61020 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB5BP61020 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB5BP61020 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RAB5BP61020 AC018445.3-201ENST00000624177 1945 ntBASIC17.02■□□□□ 0.31
RAB5BP61020 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB5BP61020 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RAB5BP61020 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RAB5BP61020 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB5BP61020 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB5BP61020 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB5BP61020 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB5BP61020 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB5BP61020 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17■□□□□ 0.31
RAB5BP61020 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17■□□□□ 0.31
RAB5BP61020 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RAB5BP61020 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17■□□□□ 0.31
RAB5BP61020 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17■□□□□ 0.31
RAB5BP61020 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB5BP61020 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17■□□□□ 0.31
RAB5BP61020 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RAB5BP61020 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17■□□□□ 0.31
RAB5BP61020 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB5BP61020 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB5BP61020 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 BX323043.1-201ENST00000641006 1765 ntBASIC16.99■□□□□ 0.31
RAB5BP61020 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB5BP61020 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5BP61020 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RAB5BP61020 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RAB5BP61020 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5BP61020 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5BP61020 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5BP61020 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB5BP61020 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB5BP61020 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB5BP61020 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms