Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.98■□□□□ 0.47
ATF4P18848 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.98■□□□□ 0.47
ATF4P18848 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 AC120498.9-201ENST00000339021 3867 ntBASIC17.98■□□□□ 0.47
ATF4P18848 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.98■□□□□ 0.47
ATF4P18848 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.98■□□□□ 0.47
ATF4P18848 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF4P18848 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.97■□□□□ 0.47
ATF4P18848 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.97■□□□□ 0.47
ATF4P18848 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ATF4P18848 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.97■□□□□ 0.47
ATF4P18848 AC005229.4-201ENST00000610085 2198 ntBASIC17.97■□□□□ 0.47
ATF4P18848 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ATF4P18848 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ATF4P18848 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATF4P18848 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF4P18848 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATF4P18848 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ATF4P18848 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF4P18848 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ATF4P18848 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ATF4P18848 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATF4P18848 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF4P18848 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF4P18848 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF4P18848 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.96■□□□□ 0.46
ATF4P18848 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
ATF4P18848 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.95■□□□□ 0.46
ATF4P18848 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.95■□□□□ 0.46
ATF4P18848 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATF4P18848 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
ATF4P18848 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ATF4P18848 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ATF4P18848 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ATF4P18848 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATF4P18848 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF4P18848 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATF4P18848 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
ATF4P18848 KRT18P10-201ENST00000388836 1287 ntBASIC17.94■□□□□ 0.46
ATF4P18848 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.94■□□□□ 0.46
ATF4P18848 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF4P18848 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.94■□□□□ 0.46
ATF4P18848 AC007029.1-201ENST00000604183 313 ntBASIC17.94■□□□□ 0.46
ATF4P18848 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.94■□□□□ 0.46
ATF4P18848 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATF4P18848 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATF4P18848 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF4P18848 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF4P18848 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.93■□□□□ 0.46
ATF4P18848 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.93■□□□□ 0.46
ATF4P18848 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.93■□□□□ 0.46
ATF4P18848 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ATF4P18848 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF4P18848 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF4P18848 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF4P18848 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF4P18848 U85056.1-201ENST00000616429 682 ntBASIC17.93■□□□□ 0.46
ATF4P18848 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF4P18848 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ATF4P18848 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms