Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.99■□□□□ 0.79
UBL4AP11441 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.99■□□□□ 0.79
UBL4AP11441 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
UBL4AP11441 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL4AP11441 AC096631.2-201ENST00000436136 790 ntBASIC19.99■□□□□ 0.79
UBL4AP11441 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBL4AP11441 AC135279.3-201ENST00000610945 1311 ntBASIC19.99■□□□□ 0.79
UBL4AP11441 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBL4AP11441 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 AC137767.1-201ENST00000602918 1920 ntBASIC19.98■□□□□ 0.79
UBL4AP11441 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
UBL4AP11441 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBL4AP11441 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.98■□□□□ 0.79
UBL4AP11441 AC024257.2-201ENST00000549699 147 ntBASIC19.98■□□□□ 0.79
UBL4AP11441 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.98■□□□□ 0.79
UBL4AP11441 MIR4767-201ENST00000582827 78 ntBASIC19.98■□□□□ 0.79
UBL4AP11441 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBL4AP11441 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.98■□□□□ 0.79
UBL4AP11441 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBL4AP11441 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
UBL4AP11441 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.97■□□□□ 0.79
UBL4AP11441 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 SLC47A1P1-202ENST00000449666 945 ntBASIC19.97■□□□□ 0.79
UBL4AP11441 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.97■□□□□ 0.79
UBL4AP11441 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.97■□□□□ 0.79
UBL4AP11441 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.97■□□□□ 0.79
UBL4AP11441 AC087239.1-201ENST00000622671 572 ntBASIC19.97■□□□□ 0.79
UBL4AP11441 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBL4AP11441 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
UBL4AP11441 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
UBL4AP11441 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UBL4AP11441 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 LINC00526-201ENST00000581067 1875 ntBASIC19.96■□□□□ 0.79
UBL4AP11441 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.96■□□□□ 0.79
UBL4AP11441 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.96■□□□□ 0.79
UBL4AP11441 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
UBL4AP11441 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBL4AP11441 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
UBL4AP11441 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.95■□□□□ 0.78
UBL4AP11441 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL4AP11441 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL4AP11441 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.95■□□□□ 0.78
UBL4AP11441 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBL4AP11441 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBL4AP11441 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.95■□□□□ 0.78
UBL4AP11441 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.95■□□□□ 0.78
UBL4AP11441 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.95■□□□□ 0.78
UBL4AP11441 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.95■□□□□ 0.78
UBL4AP11441 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL4AP11441 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.95■□□□□ 0.78
UBL4AP11441 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.95■□□□□ 0.78
UBL4AP11441 AC139530.1-201ENST00000575312 1977 ntBASIC19.95■□□□□ 0.78
UBL4AP11441 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBL4AP11441 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UBL4AP11441 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBL4AP11441 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.95■□□□□ 0.78
UBL4AP11441 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBL4AP11441 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 EP400NL-214ENST00000641289 2402 ntBASIC19.94■□□□□ 0.78
UBL4AP11441 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.94■□□□□ 0.78
UBL4AP11441 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL4AP11441 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.94■□□□□ 0.78
UBL4AP11441 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
UBL4AP11441 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms