Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 MIR6722-201ENST00000617286 78 ntBASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 YBX1P4-201ENST00000392794 808 ntBASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 AL033527.3-201ENST00000566366 1196 ntBASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV5A0A0B4J249 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV5A0A0B4J249 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 CA15P2-201ENST00000611168 834 ntBASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 AF106564.1-201ENST00000607058 2553 ntBASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV5A0A0B4J249 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV5A0A0B4J249 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms