Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 AC139713.2-207ENST00000641556 1292 ntBASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 DPY19L2P3-201ENST00000414296 2326 ntBASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TRAF6Q9Y4K3 HDC-202ENST00000543581 2180 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRAF6Q9Y4K3 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC012676.5-201ENST00000624337 1955 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 FAM81A-201ENST00000288228 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AP000346.2-202ENST00000425948 383 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 HLA-W-207ENST00000439514 771 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC133141.1-201ENST00000443015 339 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 RPL29P2-201ENST00000488409 460 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 DDX11L8-201ENST00000535849 366 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AP003419.4-201ENST00000616071 517 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AP000553.4-201ENST00000641967 471 ntBASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 KCNJ3-203ENST00000544049 4523 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 ACO1-202ENST00000379923 3601 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 PALM2-202ENST00000374531 4492 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AC012377.1-201ENST00000499797 2730 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 OAS1-203ENST00000452357 1990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 ZNF567-202ENST00000536254 2825 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAF6Q9Y4K3 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 C2-211ENST00000469372 1906 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRAF6Q9Y4K3 CLN8-212ENST00000637083 2001 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms