RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
CDH4-203ENST00000614565 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
CDH4-203ENST00000614565 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
CDH4-203ENST00000614565 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
CDH4-203ENST00000614565 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
CDH4-203ENST00000614565 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
CDH4-203ENST00000614565 RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
CDH4-203ENST00000614565 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
CDH4-203ENST00000614565 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
CDH4-203ENST00000614565 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
CDH4-203ENST00000614565 APLP2Q06481 763 aa20.18■□□□□ 0.82
CDH4-203ENST00000614565 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.8
CDH4-203ENST00000614565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
CDH4-203ENST00000614565 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
CDH4-203ENST00000614565 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDH4-203ENST00000614565 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
CDH4-203ENST00000614565 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
CDH4-203ENST00000614565 FBLN2P98095 1184 aa19.41■□□□□ 0.7
CDH4-203ENST00000614565 ABCC9O60706 1549 aa19.31■□□□□ 0.68
CDH4-203ENST00000614565 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
CDH4-203ENST00000614565 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
CDH4-203ENST00000614565 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
CDH4-203ENST00000614565 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
CDH4-203ENST00000614565 ITGAEP38570 1179 aa19.1■□□□□ 0.65
CDH4-203ENST00000614565 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.64
CDH4-203ENST00000614565 BCANQ96GW7 911 aa19.07■□□□□ 0.64
CDH4-203ENST00000614565 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
CDH4-203ENST00000614565 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
CDH4-203ENST00000614565 ARID3CA6NKF2 412 aa18.83■□□□□ 0.61
CDH4-203ENST00000614565 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
CDH4-203ENST00000614565 ESF1Q9H501 851 aaKnown RBP18.73■□□□□ 0.59
CDH4-203ENST00000614565 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
CDH4-203ENST00000614565 CCER1Q8TC90 406 aaPredicted RBP18.66■□□□□ 0.58
CDH4-203ENST00000614565 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
CDH4-203ENST00000614565 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
CDH4-203ENST00000614565 NPM1P06748 294 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDH4-203ENST00000614565 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
CDH4-203ENST00000614565 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
CDH4-203ENST00000614565 A0A0G2JS52 829 aa18.53■□□□□ 0.56
CDH4-203ENST00000614565 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
CDH4-203ENST00000614565 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
CDH4-203ENST00000614565 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
CDH4-203ENST00000614565 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
CDH4-203ENST00000614565 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
CDH4-203ENST00000614565 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
CDH4-203ENST00000614565 BCL11AQ9H165 835 aa18.39■□□□□ 0.54
CDH4-203ENST00000614565 ZNF777Q9ULD5 760 aaPredicted RBP18.39■□□□□ 0.53
CDH4-203ENST00000614565 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
CDH4-203ENST00000614565 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
CDH4-203ENST00000614565 CENPBP07199 599 aaPredicted RBP18.3■□□□□ 0.52
CDH4-203ENST00000614565 YTHDC1Q96MU7 727 aaKnown RBP18.29■□□□□ 0.52
CDH4-203ENST00000614565 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.51
CDH4-203ENST00000614565 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
CDH4-203ENST00000614565 ZBTB7CA1YPR0 619 aa18.18■□□□□ 0.5
CDH4-203ENST00000614565 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
CDH4-203ENST00000614565 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
CDH4-203ENST00000614565 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
CDH4-203ENST00000614565 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
CDH4-203ENST00000614565 NEFLP07196 543 aa18.06■□□□□ 0.48
CDH4-203ENST00000614565 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
CDH4-203ENST00000614565 HAP1P54257 671 aaPredicted RBP18.05■□□□□ 0.48
CDH4-203ENST00000614565 HRCP23327 699 aa18.04■□□□□ 0.48
CDH4-203ENST00000614565 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
CDH4-203ENST00000614565 MYT1Q01538 1121 aa18.03■□□□□ 0.48
CDH4-203ENST00000614565 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
CDH4-203ENST00000614565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
CDH4-203ENST00000614565 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
CDH4-203ENST00000614565 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
CDH4-203ENST00000614565 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
CDH4-203ENST00000614565 DAXXQ9UER7 740 aaPredicted RBP17.86■□□□□ 0.45
CDH4-203ENST00000614565 NEFMP07197 916 aa17.85■□□□□ 0.45
CDH4-203ENST00000614565 MLECQ14165 292 aa17.81■□□□□ 0.44
CDH4-203ENST00000614565 PPP1R15AO75807 674 aaPredicted RBP17.81■□□□□ 0.44
CDH4-203ENST00000614565 ZBTB47Q9UFB7 747 aaPredicted RBP17.79■□□□□ 0.44
CDH4-203ENST00000614565 LMOD2Q6P5Q4 547 aa17.78■□□□□ 0.44
CDH4-203ENST00000614565 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
CDH4-203ENST00000614565 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
CDH4-203ENST00000614565 ARXQ96QS3 562 aa17.76■□□□□ 0.43
CDH4-203ENST00000614565 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CDH4-203ENST00000614565 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.42
CDH4-203ENST00000614565 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
CDH4-203ENST00000614565 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.41
CDH4-203ENST00000614565 NPHP1O15259 732 aa17.61■□□□□ 0.41
CDH4-203ENST00000614565 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
CDH4-203ENST00000614565 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
CDH4-203ENST00000614565 KDM2AQ9Y2K7 1162 aa17.48■□□□□ 0.39
CDH4-203ENST00000614565 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
CDH4-203ENST00000614565 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
CDH4-203ENST00000614565 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
CDH4-203ENST00000614565 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
CDH4-203ENST00000614565 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.38
CDH4-203ENST00000614565 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
CDH4-203ENST00000614565 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
CDH4-203ENST00000614565 NACADO15069 1562 aa17.35■□□□□ 0.37
CDH4-203ENST00000614565 PLEKHD1A6NEE1 506 aa17.31■□□□□ 0.36
CDH4-203ENST00000614565 PPM1GO15355 546 aaPredicted RBP17.31■□□□□ 0.36
CDH4-203ENST00000614565 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
CDH4-203ENST00000614565 SOX12O15370 315 aa17.3■□□□□ 0.36
CDH4-203ENST00000614565 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
CDH4-203ENST00000614565 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms