RNA–Protein interactions for RNA: ENST00000421836.6

SPOCK3-203, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPOCK3, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-203ENST00000421836 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
SPOCK3-203ENST00000421836 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
SPOCK3-203ENST00000421836 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
SPOCK3-203ENST00000421836 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
SPOCK3-203ENST00000421836 ABCC9O60706 1549 aa23.07■■□□□ 1.28
SPOCK3-203ENST00000421836 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
SPOCK3-203ENST00000421836 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
SPOCK3-203ENST00000421836 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
SPOCK3-203ENST00000421836 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
SPOCK3-203ENST00000421836 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
SPOCK3-203ENST00000421836 NACADO15069 1562 aa22.13■■□□□ 1.13
SPOCK3-203ENST00000421836 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
SPOCK3-203ENST00000421836 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
SPOCK3-203ENST00000421836 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
SPOCK3-203ENST00000421836 UNC13AQ9UPW8 1703 aa21.53■■□□□ 1.04
SPOCK3-203ENST00000421836 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
SPOCK3-203ENST00000421836 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
SPOCK3-203ENST00000421836 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
SPOCK3-203ENST00000421836 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
SPOCK3-203ENST00000421836 WIZO95785 1651 aa21.19■□□□□ 0.98
SPOCK3-203ENST00000421836 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
SPOCK3-203ENST00000421836 CHIC1Q5VXU3 224 aa21.06■□□□□ 0.96
SPOCK3-203ENST00000421836 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
SPOCK3-203ENST00000421836 MYT1Q01538 1121 aa20.99■□□□□ 0.95
SPOCK3-203ENST00000421836 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
SPOCK3-203ENST00000421836 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
SPOCK3-203ENST00000421836 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
SPOCK3-203ENST00000421836 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
SPOCK3-203ENST00000421836 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
SPOCK3-203ENST00000421836 CCDC88BA6NC98 1476 aa20.76■□□□□ 0.91
SPOCK3-203ENST00000421836 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
SPOCK3-203ENST00000421836 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
SPOCK3-203ENST00000421836 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
SPOCK3-203ENST00000421836 PRKCSHP14314 528 aaPredicted RBP20.65■□□□□ 0.9
SPOCK3-203ENST00000421836 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
SPOCK3-203ENST00000421836 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
SPOCK3-203ENST00000421836 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
SPOCK3-203ENST00000421836 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
SPOCK3-203ENST00000421836 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
SPOCK3-203ENST00000421836 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
SPOCK3-203ENST00000421836 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
SPOCK3-203ENST00000421836 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
SPOCK3-203ENST00000421836 TTBK1Q5TCY1 1321 aaPredicted RBP20.26■□□□□ 0.83
SPOCK3-203ENST00000421836 NESP48681 1621 aa20.24■□□□□ 0.83
SPOCK3-203ENST00000421836 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
SPOCK3-203ENST00000421836 SOGA1O94964 1423 aa20.16■□□□□ 0.82
SPOCK3-203ENST00000421836 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
SPOCK3-203ENST00000421836 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
SPOCK3-203ENST00000421836 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
SPOCK3-203ENST00000421836 CFTRP13569 1480 aa20.09■□□□□ 0.81
SPOCK3-203ENST00000421836 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
SPOCK3-203ENST00000421836 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
SPOCK3-203ENST00000421836 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
SPOCK3-203ENST00000421836 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
SPOCK3-203ENST00000421836 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
SPOCK3-203ENST00000421836 CUX1P39880 1505 aa19.92■□□□□ 0.78
SPOCK3-203ENST00000421836 APLP2Q06481 763 aa19.87■□□□□ 0.77
SPOCK3-203ENST00000421836 PRDM2Q13029 1718 aa19.83■□□□□ 0.77
SPOCK3-203ENST00000421836 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
SPOCK3-203ENST00000421836 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
SPOCK3-203ENST00000421836 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
SPOCK3-203ENST00000421836 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
SPOCK3-203ENST00000421836 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
SPOCK3-203ENST00000421836 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
SPOCK3-203ENST00000421836 FGD5Q6ZNL6 1462 aa19.76■□□□□ 0.75
SPOCK3-203ENST00000421836 BCL11AQ9H165 835 aa19.74■□□□□ 0.75
SPOCK3-203ENST00000421836 CUX2O14529 1486 aa19.73■□□□□ 0.75
SPOCK3-203ENST00000421836 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
SPOCK3-203ENST00000421836 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
SPOCK3-203ENST00000421836 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
SPOCK3-203ENST00000421836 TOPBP1Q92547 1522 aa19.68■□□□□ 0.74
SPOCK3-203ENST00000421836 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
SPOCK3-203ENST00000421836 KIF21AQ7Z4S6 1674 aa19.67■□□□□ 0.74
SPOCK3-203ENST00000421836 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
SPOCK3-203ENST00000421836 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
SPOCK3-203ENST00000421836 KIF27Q86VH2 1401 aa19.64■□□□□ 0.74
SPOCK3-203ENST00000421836 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
SPOCK3-203ENST00000421836 EEA1Q15075 1411 aa19.6■□□□□ 0.73
SPOCK3-203ENST00000421836 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
SPOCK3-203ENST00000421836 IGF1RP08069 1367 aa19.56■□□□□ 0.72
SPOCK3-203ENST00000421836 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
SPOCK3-203ENST00000421836 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
SPOCK3-203ENST00000421836 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
SPOCK3-203ENST00000421836 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.71
SPOCK3-203ENST00000421836 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
SPOCK3-203ENST00000421836 FBLN2P98095 1184 aa19.5■□□□□ 0.71
SPOCK3-203ENST00000421836 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
SPOCK3-203ENST00000421836 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
SPOCK3-203ENST00000421836 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
SPOCK3-203ENST00000421836 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
SPOCK3-203ENST00000421836 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
SPOCK3-203ENST00000421836 CLIP1P30622 1438 aa19.41■□□□□ 0.7
SPOCK3-203ENST00000421836 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SPOCK3-203ENST00000421836 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
SPOCK3-203ENST00000421836 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
SPOCK3-203ENST00000421836 KIF21BO75037 1637 aa19.34■□□□□ 0.69
SPOCK3-203ENST00000421836 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
SPOCK3-203ENST00000421836 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
SPOCK3-203ENST00000421836 WDR62O43379 1518 aa19.26■□□□□ 0.67
SPOCK3-203ENST00000421836 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms