RNA–Protein interactions for RNA: ENST00000518947.6

HOXA-AS3-202, HOXA cluster antisense RNA 3, humanhuman

TSL 2 BASIC

Gene HOXA-AS3, Length 3,992 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA-AS3-202ENST00000518947 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
HOXA-AS3-202ENST00000518947 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
HOXA-AS3-202ENST00000518947 SHROOM4Q9ULL8 1493 aa21.27■□□□□ 0.99
HOXA-AS3-202ENST00000518947 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
HOXA-AS3-202ENST00000518947 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
HOXA-AS3-202ENST00000518947 ZCCHC6Q5VYS8 1495 aaKnown RBP20.83■□□□□ 0.93
HOXA-AS3-202ENST00000518947 ABCC9O60706 1549 aa20.79■□□□□ 0.92
HOXA-AS3-202ENST00000518947 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.86
HOXA-AS3-202ENST00000518947 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
HOXA-AS3-202ENST00000518947 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
HOXA-AS3-202ENST00000518947 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
HOXA-AS3-202ENST00000518947 NACADO15069 1562 aa19.92■□□□□ 0.78
HOXA-AS3-202ENST00000518947 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
HOXA-AS3-202ENST00000518947 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
HOXA-AS3-202ENST00000518947 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
HOXA-AS3-202ENST00000518947 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
HOXA-AS3-202ENST00000518947 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
HOXA-AS3-202ENST00000518947 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
HOXA-AS3-202ENST00000518947 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
HOXA-AS3-202ENST00000518947 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.68
HOXA-AS3-202ENST00000518947 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.68
HOXA-AS3-202ENST00000518947 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
HOXA-AS3-202ENST00000518947 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
HOXA-AS3-202ENST00000518947 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
HOXA-AS3-202ENST00000518947 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
HOXA-AS3-202ENST00000518947 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
HOXA-AS3-202ENST00000518947 WIZO95785 1651 aa19■□□□□ 0.63
HOXA-AS3-202ENST00000518947 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
HOXA-AS3-202ENST00000518947 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
HOXA-AS3-202ENST00000518947 FBLN2P98095 1184 aa18.92■□□□□ 0.62
HOXA-AS3-202ENST00000518947 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
HOXA-AS3-202ENST00000518947 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
HOXA-AS3-202ENST00000518947 APLP2Q06481 763 aa18.82■□□□□ 0.6
HOXA-AS3-202ENST00000518947 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
HOXA-AS3-202ENST00000518947 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
HOXA-AS3-202ENST00000518947 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
HOXA-AS3-202ENST00000518947 HRCP23327 699 aa18.74■□□□□ 0.59
HOXA-AS3-202ENST00000518947 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
HOXA-AS3-202ENST00000518947 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
HOXA-AS3-202ENST00000518947 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
HOXA-AS3-202ENST00000518947 EEA1Q15075 1411 aa18.66■□□□□ 0.58
HOXA-AS3-202ENST00000518947 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
HOXA-AS3-202ENST00000518947 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
HOXA-AS3-202ENST00000518947 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
HOXA-AS3-202ENST00000518947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
HOXA-AS3-202ENST00000518947 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
HOXA-AS3-202ENST00000518947 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
HOXA-AS3-202ENST00000518947 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
HOXA-AS3-202ENST00000518947 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
HOXA-AS3-202ENST00000518947 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
HOXA-AS3-202ENST00000518947 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
HOXA-AS3-202ENST00000518947 ARID3CA6NKF2 412 aa18.43■□□□□ 0.54
HOXA-AS3-202ENST00000518947 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
HOXA-AS3-202ENST00000518947 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
HOXA-AS3-202ENST00000518947 SOGA1O94964 1423 aa18.39■□□□□ 0.53
HOXA-AS3-202ENST00000518947 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
HOXA-AS3-202ENST00000518947 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
HOXA-AS3-202ENST00000518947 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
HOXA-AS3-202ENST00000518947 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
HOXA-AS3-202ENST00000518947 CEP162Q5TB80 1403 aa18.35■□□□□ 0.53
HOXA-AS3-202ENST00000518947 P3H3Q8IVL6 736 aa18.29■□□□□ 0.52
HOXA-AS3-202ENST00000518947 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
HOXA-AS3-202ENST00000518947 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
HOXA-AS3-202ENST00000518947 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
HOXA-AS3-202ENST00000518947 CLIP1P30622 1438 aa18.24■□□□□ 0.51
HOXA-AS3-202ENST00000518947 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
HOXA-AS3-202ENST00000518947 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
HOXA-AS3-202ENST00000518947 ITGAEP38570 1179 aa18.12■□□□□ 0.49
HOXA-AS3-202ENST00000518947 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
HOXA-AS3-202ENST00000518947 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
HOXA-AS3-202ENST00000518947 CFTRP13569 1480 aa18.08■□□□□ 0.49
HOXA-AS3-202ENST00000518947 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
HOXA-AS3-202ENST00000518947 CUX2O14529 1486 aa18.03■□□□□ 0.48
HOXA-AS3-202ENST00000518947 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.47
HOXA-AS3-202ENST00000518947 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
HOXA-AS3-202ENST00000518947 KIF21BO75037 1637 aa18■□□□□ 0.47
HOXA-AS3-202ENST00000518947 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
HOXA-AS3-202ENST00000518947 RAPGEF2Q9Y4G8 1499 aa17.98■□□□□ 0.47
HOXA-AS3-202ENST00000518947 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
HOXA-AS3-202ENST00000518947 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
HOXA-AS3-202ENST00000518947 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
HOXA-AS3-202ENST00000518947 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
HOXA-AS3-202ENST00000518947 CUX1P39880 1505 aa17.89■□□□□ 0.45
HOXA-AS3-202ENST00000518947 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
HOXA-AS3-202ENST00000518947 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
HOXA-AS3-202ENST00000518947 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
HOXA-AS3-202ENST00000518947 NPM1P06748 294 aaKnown RBP eCLIP17.84■□□□□ 0.45
HOXA-AS3-202ENST00000518947 FAM50AQ14320 339 aaKnown RBP17.8■□□□□ 0.44
HOXA-AS3-202ENST00000518947 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
HOXA-AS3-202ENST00000518947 IGF1RP08069 1367 aa17.77■□□□□ 0.43
HOXA-AS3-202ENST00000518947 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.43
HOXA-AS3-202ENST00000518947 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
HOXA-AS3-202ENST00000518947 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
HOXA-AS3-202ENST00000518947 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
HOXA-AS3-202ENST00000518947 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
HOXA-AS3-202ENST00000518947 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
HOXA-AS3-202ENST00000518947 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
HOXA-AS3-202ENST00000518947 NESP48681 1621 aa17.68■□□□□ 0.42
HOXA-AS3-202ENST00000518947 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
HOXA-AS3-202ENST00000518947 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms