Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN2Q9UHD9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN2Q9UHD9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN2Q9UHD9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN2Q9UHD9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN2Q9UHD9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.27■□□□□ 0.51
UBQLN2Q9UHD9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.27■□□□□ 0.51
UBQLN2Q9UHD9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN2Q9UHD9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN2Q9UHD9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN2Q9UHD9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 RP9P-202ENST00000450133 1212 ntBASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 MIR3960-201ENST00000583311 91 ntBASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBQLN2Q9UHD9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 AC093536.1-201ENST00000569153 554 ntBASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBQLN2Q9UHD9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 U85056.1-201ENST00000616429 682 ntBASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
UBQLN2Q9UHD9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms