Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
BBS4Q96RK4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
BBS4Q96RK4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BBS4Q96RK4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BBS4Q96RK4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BBS4Q96RK4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BBS4Q96RK4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.58■□□□□ 0.88
BBS4Q96RK4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BBS4Q96RK4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
BBS4Q96RK4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.58■□□□□ 0.88
BBS4Q96RK4 AC092053.2-201ENST00000640557 1818 ntBASIC20.57■□□□□ 0.88
BBS4Q96RK4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 CA15P2-201ENST00000611168 834 ntBASIC20.57■□□□□ 0.88
BBS4Q96RK4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 AC139530.1-201ENST00000575312 1977 ntBASIC20.57■□□□□ 0.88
BBS4Q96RK4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
BBS4Q96RK4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BBS4Q96RK4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BBS4Q96RK4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BBS4Q96RK4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.56■□□□□ 0.88
BBS4Q96RK4 AC137767.1-201ENST00000602918 1920 ntBASIC20.56■□□□□ 0.88
BBS4Q96RK4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BBS4Q96RK4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 OR2I1P-207ENST00000453522 948 ntBASIC20.55■□□□□ 0.88
BBS4Q96RK4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BBS4Q96RK4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BBS4Q96RK4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BBS4Q96RK4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BBS4Q96RK4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BBS4Q96RK4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.54■□□□□ 0.88
BBS4Q96RK4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BBS4Q96RK4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.54■□□□□ 0.88
BBS4Q96RK4 AL031602.1-201ENST00000633169 911 ntBASIC20.54■□□□□ 0.88
BBS4Q96RK4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
BBS4Q96RK4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BBS4Q96RK4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.54■□□□□ 0.88
BBS4Q96RK4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BBS4Q96RK4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
BBS4Q96RK4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BBS4Q96RK4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 AC011298.3-201ENST00000615796 283 ntBASIC20.53■□□□□ 0.88
BBS4Q96RK4 AC008406.3-201ENST00000620001 1374 ntBASIC20.53■□□□□ 0.88
BBS4Q96RK4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BBS4Q96RK4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
BBS4Q96RK4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.53■□□□□ 0.88
BBS4Q96RK4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
BBS4Q96RK4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.52■□□□□ 0.88
BBS4Q96RK4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.52■□□□□ 0.88
BBS4Q96RK4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS4Q96RK4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS4Q96RK4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS4Q96RK4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.52■□□□□ 0.88
BBS4Q96RK4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS4Q96RK4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BBS4Q96RK4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.52■□□□□ 0.88
BBS4Q96RK4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.52■□□□□ 0.88
BBS4Q96RK4 AC136469.2-201ENST00000623944 1028 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms