Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM11Q96F44 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.28
TRIM11Q96F44 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM11Q96F44 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM11Q96F44 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM11Q96F44 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM11Q96F44 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM11Q96F44 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.02■■□□□ 1.27
TRIM11Q96F44 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM11Q96F44 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM11Q96F44 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM11Q96F44 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM11Q96F44 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM11Q96F44 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM11Q96F44 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM11Q96F44 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM11Q96F44 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM11Q96F44 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRIM11Q96F44 DUX4L19-201ENST00000557448 1267 ntBASIC23.01■■□□□ 1.27
TRIM11Q96F44 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23■■□□□ 1.27
TRIM11Q96F44 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23■■□□□ 1.27
TRIM11Q96F44 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TRIM11Q96F44 AL138724.1-201ENST00000606771 1088 ntBASIC23■■□□□ 1.27
TRIM11Q96F44 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23■■□□□ 1.27
TRIM11Q96F44 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM11Q96F44 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TRIM11Q96F44 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TRIM11Q96F44 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.99■■□□□ 1.27
TRIM11Q96F44 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIM11Q96F44 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.99■■□□□ 1.27
TRIM11Q96F44 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM11Q96F44 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 AC079089.2-201ENST00000531211 1277 ntBASIC22.98■■□□□ 1.27
TRIM11Q96F44 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.98■■□□□ 1.27
TRIM11Q96F44 AC087239.1-201ENST00000622671 572 ntBASIC22.98■■□□□ 1.27
TRIM11Q96F44 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.98■■□□□ 1.27
TRIM11Q96F44 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM11Q96F44 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TRIM11Q96F44 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.97■■□□□ 1.27
TRIM11Q96F44 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.97■■□□□ 1.27
TRIM11Q96F44 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TRIM11Q96F44 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.97■■□□□ 1.27
TRIM11Q96F44 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM11Q96F44 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
TRIM11Q96F44 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.97■■□□□ 1.27
TRIM11Q96F44 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM11Q96F44 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 SYT6-210ENST00000641643 1587 ntBASIC22.96■■□□□ 1.27
TRIM11Q96F44 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM11Q96F44 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM11Q96F44 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms