Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFI1BQ5VTD9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 AL161729.1-201ENST00000604104 1402 ntBASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 AC087289.5-201ENST00000586076 3175 ntBASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFI1BQ5VTD9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 AC074183.2-201ENST00000623112 922 ntBASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFI1BQ5VTD9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 ESRRAP2-201ENST00000418437 1549 ntBASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFI1BQ5VTD9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GFI1BQ5VTD9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GFI1BQ5VTD9 FAM99A-202ENST00000538190 1989 ntBASIC16.89■□□□□ 0.3
GFI1BQ5VTD9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GFI1BQ5VTD9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.89■□□□□ 0.3
GFI1BQ5VTD9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GFI1BQ5VTD9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 AL022069.1-201ENST00000568025 1636 ntBASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 AC010980.1-201ENST00000587192 1142 ntBASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 PVT1_1.1-201ENST00000615125 194 ntBASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 AC012354.3-201ENST00000623734 483 ntBASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFI1BQ5VTD9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GFI1BQ5VTD9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms