Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.241e-6■■■■□ 19.4
EWSR1Q01844 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.061e-6■■■■□ 19.4
EWSR1Q01844 LTBP4-223ENST00000598717 811 ntTSL 515.04■□□□□ -01e-6■■■■□ 19.4
EWSR1Q01844 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.121e-6■■■■□ 19.4
EWSR1Q01844 LTBP4-208ENST00000593738 302 ntTSL 313.93□□□□□ -0.181e-6■■■■□ 19.4
EWSR1Q01844 SND1-209ENST00000470723 568 ntTSL 49.61□□□□□ -0.871e-6■■■■□ 19.4
EWSR1Q01844 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.971e-6■■■■□ 19.4
EWSR1Q01844 SND1-211ENST00000484767 460 ntTSL 47.97□□□□□ -1.131e-6■■■■□ 19.4
EWSR1Q01844 SND1-213ENST00000486037 695 ntTSL 37.46□□□□□ -1.221e-6■■■■□ 19.4
EWSR1Q01844 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.94□□□□□ -0.185e-7■■■■□ 19.4
EWSR1Q01844 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.25e-7■■■■□ 19.4
EWSR1Q01844 TCF25-226ENST00000640279 2688 ntTSL 513.76□□□□□ -0.215e-7■■■■□ 19.4
EWSR1Q01844 PTBP1-211ENST00000587094 273 ntTSL 38.56□□□□□ -1.046e-9■■■■□ 19.4
EWSR1Q01844 GET4-203ENST00000412734 873 ntTSL 210.93□□□□□ -0.664e-7■■■■□ 19.4
EWSR1Q01844 AGO2-203ENST00000518019 421 ntTSL 211.49□□□□□ -0.571e-6■■■■□ 19.4
EWSR1Q01844 RER1-205ENST00000443438 540 ntTSL 27.05□□□□□ -1.283e-7■■■■□ 19.4
EWSR1Q01844 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.112e-6■■■■□ 19.3
EWSR1Q01844 CCDC57-214ENST00000582040 330 ntTSL 310.69□□□□□ -0.72e-6■■■■□ 19.3
EWSR1Q01844 GAK-210ENST00000507991 328 ntTSL 57.63□□□□□ -1.199e-7■■■■□ 19.3
EWSR1Q01844 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.94■□□□□ 0.35e-7■■■■□ 19.3
EWSR1Q01844 PLCXD1-211ENST00000484611 540 ntTSL 411.27□□□□□ -0.619e-7■■■■□ 19.3
EWSR1Q01844 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 211.25□□□□□ -0.619e-7■■■■□ 19.3
EWSR1Q01844 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.719e-7■■■■□ 19.3
EWSR1Q01844 MAD1L1-217ENST00000469871 477 ntTSL 36.06□□□□□ -1.441e-6■■■■□ 19.3
EWSR1Q01844 UBALD1-207ENST00000591113 659 ntTSL 516.5■□□□□ 0.236e-7■■■■□ 19.3
EWSR1Q01844 BCL6-205ENST00000438077 709 ntTSL 315.16■□□□□ 0.022e-6■■■■□ 19.3
EWSR1Q01844 NACC1-203ENST00000586171 534 ntTSL 513.71□□□□□ -0.212e-6■■■■□ 19.3
EWSR1Q01844 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.292e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-219ENST00000588575 559 ntTSL 414.96□□□□□ -0.012e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.44□□□□□ -0.12e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.352e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.58□□□□□ -0.392e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.62e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.15□□□□□ -0.622e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.662e-6■■■■□ 19.3
EWSR1Q01844 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC9.72□□□□□ -0.852e-6■■■■□ 19.3
EWSR1Q01844 GRK2-209ENST00000530291 324 ntTSL 27.95□□□□□ -1.146e-7■■■□□ 19.2
EWSR1Q01844 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-7■■■□□ 19.2
EWSR1Q01844 SEPT9-215ENST00000586521 601 ntTSL 413.53□□□□□ -0.243e-6■■■□□ 19.2
EWSR1Q01844 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.173e-6■■■□□ 19.2
EWSR1Q01844 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC9.79□□□□□ -0.843e-6■■■□□ 19.2
EWSR1Q01844 TMEM74B-203ENST00000481747 582 ntTSL 220.48■□□□□ 0.879e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-214ENST00000493924 1573 ntTSL 515.05■□□□□ -08e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-216ENST00000498313 988 ntTSL 514.32□□□□□ -0.128e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-203ENST00000381117 798 ntTSL 1 (best)14.06□□□□□ -0.168e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-209ENST00000479508 741 ntTSL 214.06□□□□□ -0.168e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.288e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.28□□□□□ -0.288e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-202ENST00000339046 1202 ntTSL 212.74□□□□□ -0.378e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.378e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-208ENST00000461200 3325 ntTSL 212.31□□□□□ -0.448e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-206ENST00000446063 1262 ntTSL 1 (best)11.94□□□□□ -0.58e-7■■■□□ 19.2
EWSR1Q01844 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.648e-7■■■□□ 19.2
EWSR1Q01844 ATXN2-218ENST00000549455 568 ntTSL 410.82□□□□□ -0.682e-7■■■□□ 19.2
EWSR1Q01844 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.622e-7■■■□□ 19.2
EWSR1Q01844 MGAT4B-210ENST00000519965 524 ntTSL 39.66□□□□□ -0.861e-6■■■□□ 19.2
EWSR1Q01844 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)23.13■■□□□ 1.294e-7■■■□□ 19.2
EWSR1Q01844 VEGFA-217ENST00000518538 535 ntTSL 216.32■□□□□ 0.24e-7■■■□□ 19.2
EWSR1Q01844 VEGFA-216ENST00000512683 475 ntTSL 1 (best)9.27□□□□□ -0.934e-7■■■□□ 19.2
EWSR1Q01844 SEPT9-245ENST00000592481 1291 ntTSL 516.22■□□□□ 0.194e-6■■■□□ 19.2
EWSR1Q01844 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.094e-6■■■□□ 19.2
EWSR1Q01844 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.34e-6■■■□□ 19.2
EWSR1Q01844 SEPT9-239ENST00000591704 749 ntTSL 28.69□□□□□ -1.024e-6■■■□□ 19.2
EWSR1Q01844 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.96□□□□□ -0.171e-7■■■□□ 19.2
EWSR1Q01844 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.512e-7■■■□□ 19.1
EWSR1Q01844 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.362e-7■■■□□ 19.1
EWSR1Q01844 CNN2-212ENST00000607102 307 ntTSL 1 (best)12.76□□□□□ -0.372e-7■■■□□ 19.1
EWSR1Q01844 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.392e-7■■■□□ 19.1
EWSR1Q01844 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.63□□□□□ -0.392e-7■■■□□ 19.1
EWSR1Q01844 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.86□□□□□ -0.512e-7■■■□□ 19.1
EWSR1Q01844 CNN2-210ENST00000569352 731 ntTSL 511.53□□□□□ -0.562e-7■■■□□ 19.1
EWSR1Q01844 CNN2-204ENST00000562075 623 ntTSL 1 (best)11.49□□□□□ -0.572e-7■■■□□ 19.1
EWSR1Q01844 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC9.86□□□□□ -0.832e-7■■■□□ 19.1
EWSR1Q01844 CNN2-211ENST00000606983 537 ntTSL 38.73□□□□□ -1.012e-7■■■□□ 19.1
EWSR1Q01844 MAEA-204ENST00000503162 2069 ntTSL 213.98□□□□□ -0.173e-7■■■□□ 19.1
EWSR1Q01844 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.193e-8■■■□□ 19.1
EWSR1Q01844 PLCXD1-208ENST00000445062 555 ntTSL 416■□□□□ 0.153e-8■■■□□ 19.1
EWSR1Q01844 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.643e-8■■■□□ 19.1
EWSR1Q01844 PLCXD1-205ENST00000429181 469 ntTSL 410.85□□□□□ -0.673e-8■■■□□ 19.1
EWSR1Q01844 PLCXD1-209ENST00000447472 587 ntAPPRIS ALT2 TSL 410.85□□□□□ -0.673e-8■■■□□ 19.1
EWSR1Q01844 PLCXD1-204ENST00000415337 579 ntAPPRIS ALT2 TSL 510.52□□□□□ -0.733e-8■■■□□ 19.1
EWSR1Q01844 PLCXD1-207ENST00000443019 284 ntTSL 510.37□□□□□ -0.753e-8■■■□□ 19.1
EWSR1Q01844 ANP32A-205ENST00000483221 420 ntTSL 310.84□□□□□ -0.672e-6■■■□□ 19.1
EWSR1Q01844 ANP32A-209ENST00000495764 504 ntTSL 510.84□□□□□ -0.672e-6■■■□□ 19.1
EWSR1Q01844 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.129e-7■■■□□ 19.1
EWSR1Q01844 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.065e-8■■■□□ 19.1
EWSR1Q01844 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.91□□□□□ -0.185e-8■■■□□ 19.1
EWSR1Q01844 EEF1D-244ENST00000532543 791 ntTSL 312.02□□□□□ -0.492e-7■■■□□ 19.1
EWSR1Q01844 TSPAN32-212ENST00000484523 582 ntTSL 510.74□□□□□ -0.696e-7■■■□□ 19.1
EWSR1Q01844 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.57e-8■■■□□ 19.1
EWSR1Q01844 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.57e-8■■■□□ 19.1
EWSR1Q01844 FASN-207ENST00000635197 627 ntTSL 311.68□□□□□ -0.547e-8■■■□□ 19.1
EWSR1Q01844 KDM4B-212ENST00000624683 5076 nt12.58□□□□□ -0.41e-6■■■□□ 19.1
EWSR1Q01844 ANKRD11-209ENST00000564553 471 ntTSL 310.65□□□□□ -0.78e-7■■■□□ 19.1
EWSR1Q01844 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.564e-7■■■□□ 19.1
EWSR1Q01844 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.34□□□□□ -0.594e-7■■■□□ 19.1
EWSR1Q01844 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.222e-6■■■□□ 19.1
EWSR1Q01844 PGS1-211ENST00000589425 1944 ntTSL 1 (best)15.77■□□□□ 0.122e-6■■■□□ 19.1
EWSR1Q01844 PGS1-209ENST00000588169 1700 ntTSL 215.7■□□□□ 0.12e-6■■■□□ 19.1
EWSR1Q01844 PGS1-212ENST00000589426 2033 ntTSL 1 (best)15.55■□□□□ 0.082e-6■■■□□ 19.1
Retrieved 100 of 7,101 protein–RNA pairs in 39.8 ms