Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPSAP08865 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RPSAP08865 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPSAP08865 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPSAP08865 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.92■□□□□ 0.94
RPSAP08865 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPSAP08865 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
RPSAP08865 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RPSAP08865 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPSAP08865 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RPSAP08865 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.92■□□□□ 0.94
RPSAP08865 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RPSAP08865 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPSAP08865 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPSAP08865 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RPSAP08865 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPSAP08865 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.91■□□□□ 0.94
RPSAP08865 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.91■□□□□ 0.94
RPSAP08865 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.91■□□□□ 0.94
RPSAP08865 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPSAP08865 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RPSAP08865 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.91■□□□□ 0.94
RPSAP08865 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPSAP08865 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.9■□□□□ 0.94
RPSAP08865 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPSAP08865 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPSAP08865 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPSAP08865 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPSAP08865 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPSAP08865 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPSAP08865 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPSAP08865 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPSAP08865 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.9■□□□□ 0.94
RPSAP08865 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.9■□□□□ 0.94
RPSAP08865 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.89■□□□□ 0.94
RPSAP08865 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RPSAP08865 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPSAP08865 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RPSAP08865 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.89■□□□□ 0.93
RPSAP08865 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPSAP08865 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPSAP08865 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RPSAP08865 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPSAP08865 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPSAP08865 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPSAP08865 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPSAP08865 HLA-V-202ENST00000446817 847 ntBASIC20.88■□□□□ 0.93
RPSAP08865 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPSAP08865 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
RPSAP08865 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPSAP08865 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.87■□□□□ 0.93
RPSAP08865 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.87■□□□□ 0.93
RPSAP08865 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.87■□□□□ 0.93
RPSAP08865 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.87■□□□□ 0.93
RPSAP08865 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.87■□□□□ 0.93
RPSAP08865 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPSAP08865 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.86■□□□□ 0.93
RPSAP08865 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPSAP08865 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
RPSAP08865 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
RPSAP08865 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 AC026471.1-201ENST00000564629 3026 ntBASIC20.86■□□□□ 0.93
RPSAP08865 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.86■□□□□ 0.93
RPSAP08865 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
RPSAP08865 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPSAP08865 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.86■□□□□ 0.93
RPSAP08865 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.85■□□□□ 0.93
RPSAP08865 AFG3L1P-217ENST00000557444 2447 ntBASIC20.85■□□□□ 0.93
RPSAP08865 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPSAP08865 PCDHAC2-203ENST00000615316 3011 ntBASIC20.85■□□□□ 0.93
RPSAP08865 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPSAP08865 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPSAP08865 RPS2P35-201ENST00000443417 897 ntBASIC20.85■□□□□ 0.93
RPSAP08865 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.85■□□□□ 0.93
RPSAP08865 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.85■□□□□ 0.93
RPSAP08865 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPSAP08865 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms