Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 WAC-204ENST00000375646 2176 ntTSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 CYP2B7P-201ENST00000541697 1476 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 ZNF488-202ENST00000591025 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC021305.1-201ENST00000520656 1514 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC078991.1-201ENST00000437297 610 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC010677.1-201ENST00000441690 412 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC004837.1-201ENST00000446267 564 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC090136.2-201ENST00000517809 420 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 PRKXP1-201ENST00000561423 1122 ntBASIC10.81□□□□□ -0.68
NICN1Q9BSH3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 ITGA11-201ENST00000315757 3955 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 GSTA2-201ENST00000493422 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 ZNF548-201ENST00000336128 2115 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC10.81□□□□□ -0.68
NICN1Q9BSH3 AC073578.3-201ENST00000624926 4191 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AL008628.1-201ENST00000564198 5187 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 ACO1-202ENST00000379923 3601 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 SLC25A6P1-201ENST00000412123 775 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 HMGB3P4-201ENST00000428776 514 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AL356000.1-201ENST00000441073 1238 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 TMED1-204ENST00000588289 541 ntTSL 2 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 MIR6842-201ENST00000612539 65 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 MEP1AP1-201ENST00000636082 1097 ntBASIC10.8□□□□□ -0.68
NICN1Q9BSH3 ESR1-214ENST00000638569 132 ntTSL 5 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NICN1Q9BSH3 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms