RNA–Protein interactions for RNA: ENST00000591025.1

ZNF488-202, Transcript of zinc finger protein 488, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF488, Length 3,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488-202ENST00000591025 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
ZNF488-202ENST00000591025 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
ZNF488-202ENST00000591025 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
ZNF488-202ENST00000591025 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
ZNF488-202ENST00000591025 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
ZNF488-202ENST00000591025 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
ZNF488-202ENST00000591025 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
ZNF488-202ENST00000591025 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
ZNF488-202ENST00000591025 NACADO15069 1562 aa20.52■□□□□ 0.88
ZNF488-202ENST00000591025 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
ZNF488-202ENST00000591025 ABCC9O60706 1549 aa20.35■□□□□ 0.85
ZNF488-202ENST00000591025 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
ZNF488-202ENST00000591025 HRCP23327 699 aa20.06■□□□□ 0.8
ZNF488-202ENST00000591025 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
ZNF488-202ENST00000591025 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
ZNF488-202ENST00000591025 LOC105371045A0A1W2PR82 267 aa19.87■□□□□ 0.77
ZNF488-202ENST00000591025 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
ZNF488-202ENST00000591025 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
ZNF488-202ENST00000591025 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
ZNF488-202ENST00000591025 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
ZNF488-202ENST00000591025 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
ZNF488-202ENST00000591025 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
ZNF488-202ENST00000591025 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
ZNF488-202ENST00000591025 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
ZNF488-202ENST00000591025 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
ZNF488-202ENST00000591025 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
ZNF488-202ENST00000591025 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
ZNF488-202ENST00000591025 WIZO95785 1651 aa19.21■□□□□ 0.67
ZNF488-202ENST00000591025 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
ZNF488-202ENST00000591025 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
ZNF488-202ENST00000591025 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
ZNF488-202ENST00000591025 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
ZNF488-202ENST00000591025 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
ZNF488-202ENST00000591025 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
ZNF488-202ENST00000591025 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
ZNF488-202ENST00000591025 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
ZNF488-202ENST00000591025 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
ZNF488-202ENST00000591025 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
ZNF488-202ENST00000591025 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
ZNF488-202ENST00000591025 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
ZNF488-202ENST00000591025 CC2D2AQ9P2K1 1620 aa18.78■□□□□ 0.6
ZNF488-202ENST00000591025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
ZNF488-202ENST00000591025 CCER1Q8TC90 406 aaPredicted RBP18.73■□□□□ 0.59
ZNF488-202ENST00000591025 SOGA1O94964 1423 aa18.72■□□□□ 0.59
ZNF488-202ENST00000591025 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
ZNF488-202ENST00000591025 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
ZNF488-202ENST00000591025 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
ZNF488-202ENST00000591025 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
ZNF488-202ENST00000591025 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
ZNF488-202ENST00000591025 EEA1Q15075 1411 aa18.62■□□□□ 0.57
ZNF488-202ENST00000591025 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
ZNF488-202ENST00000591025 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
ZNF488-202ENST00000591025 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
ZNF488-202ENST00000591025 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
ZNF488-202ENST00000591025 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
ZNF488-202ENST00000591025 GOLGA3Q08378 1498 aa18.52■□□□□ 0.56
ZNF488-202ENST00000591025 DIEXFQ68CQ4 756 aaKnown RBP18.42■□□□□ 0.54
ZNF488-202ENST00000591025 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
ZNF488-202ENST00000591025 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
ZNF488-202ENST00000591025 ACIN1Q9UKV3 1341 aaKnown RBP18.35■□□□□ 0.53
ZNF488-202ENST00000591025 KIF21BO75037 1637 aa18.34■□□□□ 0.53
ZNF488-202ENST00000591025 CLIP1P30622 1438 aa18.32■□□□□ 0.52
ZNF488-202ENST00000591025 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
ZNF488-202ENST00000591025 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
ZNF488-202ENST00000591025 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
ZNF488-202ENST00000591025 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
ZNF488-202ENST00000591025 CFTRP13569 1480 aa18.26■□□□□ 0.51
ZNF488-202ENST00000591025 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
ZNF488-202ENST00000591025 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
ZNF488-202ENST00000591025 RAPGEF2Q9Y4G8 1499 aa18.25■□□□□ 0.51
ZNF488-202ENST00000591025 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
ZNF488-202ENST00000591025 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
ZNF488-202ENST00000591025 APLP2Q06481 763 aa18.21■□□□□ 0.51
ZNF488-202ENST00000591025 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
ZNF488-202ENST00000591025 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
ZNF488-202ENST00000591025 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
ZNF488-202ENST00000591025 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
ZNF488-202ENST00000591025 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.48
ZNF488-202ENST00000591025 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
ZNF488-202ENST00000591025 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
ZNF488-202ENST00000591025 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
ZNF488-202ENST00000591025 MIER1Q8N108 512 aa18.01■□□□□ 0.47
ZNF488-202ENST00000591025 ARAP1Q96P48 1450 aa18■□□□□ 0.47
ZNF488-202ENST00000591025 CUX1P39880 1505 aa17.97■□□□□ 0.47
ZNF488-202ENST00000591025 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
ZNF488-202ENST00000591025 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
ZNF488-202ENST00000591025 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
ZNF488-202ENST00000591025 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
ZNF488-202ENST00000591025 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
ZNF488-202ENST00000591025 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
ZNF488-202ENST00000591025 WDR97A6NE52 1622 aa17.89■□□□□ 0.46
ZNF488-202ENST00000591025 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
ZNF488-202ENST00000591025 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
ZNF488-202ENST00000591025 WDR62O43379 1518 aa17.89■□□□□ 0.45
ZNF488-202ENST00000591025 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
ZNF488-202ENST00000591025 NESP48681 1621 aa17.84■□□□□ 0.45
ZNF488-202ENST00000591025 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
ZNF488-202ENST00000591025 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
ZNF488-202ENST00000591025 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
ZNF488-202ENST00000591025 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms