RNA–Protein interactions for RNA: ENST00000315757.8

ITGA11-201, Transcript of integrin subunit alpha 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA11, Length 3,955 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA11-201ENST00000315757 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
ITGA11-201ENST00000315757 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
ITGA11-201ENST00000315757 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
ITGA11-201ENST00000315757 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
ITGA11-201ENST00000315757 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
ITGA11-201ENST00000315757 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
ITGA11-201ENST00000315757 PCGF6Q9BYE7 350 aa19.91■□□□□ 0.78
ITGA11-201ENST00000315757 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
ITGA11-201ENST00000315757 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
ITGA11-201ENST00000315757 PPARGC1BQ86YN6 1023 aaKnown RBP19.71■□□□□ 0.75
ITGA11-201ENST00000315757 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
ITGA11-201ENST00000315757 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
ITGA11-201ENST00000315757 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
ITGA11-201ENST00000315757 ABCC9O60706 1549 aa19.41■□□□□ 0.7
ITGA11-201ENST00000315757 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
ITGA11-201ENST00000315757 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
ITGA11-201ENST00000315757 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
ITGA11-201ENST00000315757 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
ITGA11-201ENST00000315757 HRCP23327 699 aa18.89■□□□□ 0.61
ITGA11-201ENST00000315757 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
ITGA11-201ENST00000315757 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
ITGA11-201ENST00000315757 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
ITGA11-201ENST00000315757 TRIM26Q12899 539 aaPredicted RBP18.78■□□□□ 0.6
ITGA11-201ENST00000315757 APLP2Q06481 763 aa18.77■□□□□ 0.6
ITGA11-201ENST00000315757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
ITGA11-201ENST00000315757 HNRNPUL2Q1KMD3 747 aaKnown RBP18.64■□□□□ 0.57
ITGA11-201ENST00000315757 ITGAEP38570 1179 aa18.63■□□□□ 0.57
ITGA11-201ENST00000315757 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
ITGA11-201ENST00000315757 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
ITGA11-201ENST00000315757 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.54
ITGA11-201ENST00000315757 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
ITGA11-201ENST00000315757 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.51
ITGA11-201ENST00000315757 P3H3Q8IVL6 736 aa18.23■□□□□ 0.51
ITGA11-201ENST00000315757 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
ITGA11-201ENST00000315757 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
ITGA11-201ENST00000315757 CNGB1Q14028 1251 aaPredicted RBP18.12■□□□□ 0.49
ITGA11-201ENST00000315757 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
ITGA11-201ENST00000315757 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
ITGA11-201ENST00000315757 DIEXFQ68CQ4 756 aaKnown RBP18.01■□□□□ 0.47
ITGA11-201ENST00000315757 FAM50AQ14320 339 aaKnown RBP17.98■□□□□ 0.47
ITGA11-201ENST00000315757 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
ITGA11-201ENST00000315757 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
ITGA11-201ENST00000315757 CENPBP07199 599 aaPredicted RBP17.9■□□□□ 0.46
ITGA11-201ENST00000315757 SOGA1O94964 1423 aa17.88■□□□□ 0.45
ITGA11-201ENST00000315757 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
ITGA11-201ENST00000315757 WIZO95785 1651 aa17.83■□□□□ 0.44
ITGA11-201ENST00000315757 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
ITGA11-201ENST00000315757 FBLN2P98095 1184 aa17.81■□□□□ 0.44
ITGA11-201ENST00000315757 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.43
ITGA11-201ENST00000315757 NACADO15069 1562 aa17.75■□□□□ 0.43
ITGA11-201ENST00000315757 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
ITGA11-201ENST00000315757 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
ITGA11-201ENST00000315757 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
ITGA11-201ENST00000315757 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
ITGA11-201ENST00000315757 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
ITGA11-201ENST00000315757 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
ITGA11-201ENST00000315757 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
ITGA11-201ENST00000315757 BCANQ96GW7 911 aa17.59■□□□□ 0.41
ITGA11-201ENST00000315757 CLIP1P30622 1438 aa17.58■□□□□ 0.41
ITGA11-201ENST00000315757 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.4
ITGA11-201ENST00000315757 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
ITGA11-201ENST00000315757 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
ITGA11-201ENST00000315757 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
ITGA11-201ENST00000315757 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
ITGA11-201ENST00000315757 MIER1Q8N108 512 aa17.52■□□□□ 0.39
ITGA11-201ENST00000315757 KANK4Q5T7N3 995 aaPredicted RBP17.5■□□□□ 0.39
ITGA11-201ENST00000315757 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
ITGA11-201ENST00000315757 ZNF777Q9ULD5 760 aaPredicted RBP17.48■□□□□ 0.39
ITGA11-201ENST00000315757 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
ITGA11-201ENST00000315757 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
ITGA11-201ENST00000315757 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
ITGA11-201ENST00000315757 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
ITGA11-201ENST00000315757 GOLGA3Q08378 1498 aa17.38■□□□□ 0.37
ITGA11-201ENST00000315757 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
ITGA11-201ENST00000315757 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.36
ITGA11-201ENST00000315757 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
ITGA11-201ENST00000315757 RAPGEF2Q9Y4G8 1499 aa17.27■□□□□ 0.36
ITGA11-201ENST00000315757 NEFLP07196 543 aa17.27■□□□□ 0.35
ITGA11-201ENST00000315757 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
ITGA11-201ENST00000315757 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
ITGA11-201ENST00000315757 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
ITGA11-201ENST00000315757 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
ITGA11-201ENST00000315757 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
ITGA11-201ENST00000315757 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
ITGA11-201ENST00000315757 CUX2O14529 1486 aa17.22■□□□□ 0.35
ITGA11-201ENST00000315757 TDRD9Q8NDG6 1382 aaKnown RBP17.2■□□□□ 0.34
ITGA11-201ENST00000315757 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
ITGA11-201ENST00000315757 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
ITGA11-201ENST00000315757 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
ITGA11-201ENST00000315757 EEA1Q15075 1411 aa17.14■□□□□ 0.34
ITGA11-201ENST00000315757 FOXD1Q16676 465 aa17.14■□□□□ 0.33
ITGA11-201ENST00000315757 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
ITGA11-201ENST00000315757 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
ITGA11-201ENST00000315757 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
ITGA11-201ENST00000315757 ANP32CO43423 234 aa17.1■□□□□ 0.33
ITGA11-201ENST00000315757 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
ITGA11-201ENST00000315757 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
ITGA11-201ENST00000315757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
ITGA11-201ENST00000315757 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
ITGA11-201ENST00000315757 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms