Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNF1Q9H3M0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 AF131216.4-201ENST00000638924 1588 ntBASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNF1Q9H3M0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KCNF1Q9H3M0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNF1Q9H3M0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNF1Q9H3M0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNF1Q9H3M0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.83■■□□□ 1.4
KCNF1Q9H3M0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.83■■□□□ 1.4
KCNF1Q9H3M0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNF1Q9H3M0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNF1Q9H3M0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 AC004448.1-201ENST00000458332 883 ntBASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.82■■□□□ 1.4
KCNF1Q9H3M0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.81■■□□□ 1.4
KCNF1Q9H3M0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
KCNF1Q9H3M0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KCNF1Q9H3M0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNF1Q9H3M0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.8■■□□□ 1.4
KCNF1Q9H3M0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNF1Q9H3M0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNF1Q9H3M0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 MIR639-201ENST00000384974 98 ntBASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 DUX4L9-201ENST00000449051 1259 ntBASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 MIR6765-201ENST00000614092 87 ntBASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNF1Q9H3M0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms