Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 UBE2E1-208ENST00000481622 432 ntTSL 523.09■■□□□ 1.292e-6■■■■■ 30.2
XRN2Q9H0D6 UBE2E1-209ENST00000484048 786 ntTSL 318.28■□□□□ 0.522e-6■■■■■ 30.2
XRN2Q9H0D6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.777e-7■■■■■ 30.1
XRN2Q9H0D6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.627e-7■■■■■ 30.1
XRN2Q9H0D6 PCSK6-203ENST00000557794 1196 ntTSL 513.38□□□□□ -0.277e-7■■■■■ 30.1
XRN2Q9H0D6 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-7■■■■■ 30.1
XRN2Q9H0D6 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)9.23□□□□□ -0.932e-7■■■■■ 30.1
XRN2Q9H0D6 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.942e-7■■■■■ 30.1
XRN2Q9H0D6 ATXN1-207ENST00000483954 744 ntTSL 35.12□□□□□ -1.592e-7■■■■■ 30.1
XRN2Q9H0D6 PPP4R1-204ENST00000577393 531 ntTSL 431.1■■■□□ 2.571e-10■■■■■ 30
XRN2Q9H0D6 KCTD15-204ENST00000587658 632 ntTSL 328.36■■■□□ 2.133e-8■■■■■ 30
XRN2Q9H0D6 MIR663AHG-229ENST00000608521 553 ntTSL 524.05■■□□□ 1.442e-15■■■■■ 30
XRN2Q9H0D6 SBNO2-207ENST00000590176 561 ntTSL 422.32■■□□□ 1.163e-6■■■■■ 30
XRN2Q9H0D6 PPP4R1-215ENST00000580182 582 ntTSL 321.89■■□□□ 1.091e-10■■■■■ 30
XRN2Q9H0D6 MIR663AHG-235ENST00000609914 644 ntTSL 521.36■■□□□ 1.012e-15■■■■■ 30
XRN2Q9H0D6 MIR663AHG-205ENST00000594135 654 ntTSL 521.36■■□□□ 1.012e-15■■■■■ 30
XRN2Q9H0D6 BCL6-208ENST00000479110 635 ntTSL 220.28■□□□□ 0.844e-14■■■■■ 30
XRN2Q9H0D6 AC068580.4-204ENST00000427721 1007 ntTSL 219.08■□□□□ 0.642e-7■■■■■ 30
XRN2Q9H0D6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.65■□□□□ 0.584e-14■■■■■ 30
XRN2Q9H0D6 TSNARE1-206ENST00000520462 589 ntTSL 418.23■□□□□ 0.513e-6■■■■■ 30
XRN2Q9H0D6 PPP4R1-206ENST00000577779 481 ntTSL 217.93■□□□□ 0.461e-10■■■■■ 30
XRN2Q9H0D6 VARS-226ENST00000483275 450 ntTSL 317.08■□□□□ 0.325e-6■■■■■ 30
XRN2Q9H0D6 MIR663AHG-219ENST00000598451 511 ntTSL 516.35■□□□□ 0.212e-15■■■■■ 30
XRN2Q9H0D6 MIR663AHG-215ENST00000597361 586 ntTSL 516.35■□□□□ 0.212e-15■■■■■ 30
XRN2Q9H0D6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.192e-7■■■■■ 30
XRN2Q9H0D6 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC14.92□□□□□ -0.024e-14■■■■■ 30
XRN2Q9H0D6 AC006001.2-203ENST00000428557 304 ntTSL 314.08□□□□□ -0.164e-14■■■■■ 30
XRN2Q9H0D6 PPP4R1-208ENST00000578178 468 ntTSL 412.95□□□□□ -0.341e-10■■■■■ 30
XRN2Q9H0D6 PPP4R1-224ENST00000583092 554 ntTSL 412.43□□□□□ -0.421e-10■■■■■ 30
XRN2Q9H0D6 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.421e-10■■■■■ 30
XRN2Q9H0D6 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.492e-7■■■■■ 30
XRN2Q9H0D6 SMOX-210ENST00000493223 280 ntTSL 311.78□□□□□ -0.524e-6■■■■■ 30
XRN2Q9H0D6 PPP4R1-201ENST00000285124 2917 ntTSL 510.6□□□□□ -0.711e-10■■■■■ 30
XRN2Q9H0D6 PPP4R1-211ENST00000578875 580 ntTSL 410.44□□□□□ -0.741e-10■■■■■ 30
XRN2Q9H0D6 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.771e-10■■■■■ 30
XRN2Q9H0D6 MIR663AHG-202ENST00000432499 1129 ntTSL 55.49□□□□□ -1.532e-15■■■■■ 30
XRN2Q9H0D6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.4□□□□□ -1.872e-15■■■■■ 30
XRN2Q9H0D6 ZNF611-216ENST00000601447 495 ntTSL 317.18■□□□□ 0.344e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-211ENST00000598639 738 ntTSL 313.05□□□□□ -0.324e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-207ENST00000596702 538 ntTSL 4 BASIC11.72□□□□□ -0.534e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-209ENST00000597343 860 ntTSL 510.67□□□□□ -0.74e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-210ENST00000597566 509 ntTSL 410.65□□□□□ -0.74e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-220ENST00000640952 577 ntTSL 410.39□□□□□ -0.754e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC10.15□□□□□ -0.784e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC9.22□□□□□ -0.934e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-213ENST00000599798 302 ntTSL 59.2□□□□□ -0.944e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.96□□□□□ -0.984e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.57□□□□□ -1.044e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.044e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-205ENST00000595001 4796 ntTSL 1 (best)8.36□□□□□ -1.074e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.3□□□□□ -1.084e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-212ENST00000598723 565 ntTSL 48.16□□□□□ -1.14e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-215ENST00000601249 2546 ntTSL 1 (best)8.05□□□□□ -1.124e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.594e-7■■■■■ 29.9
XRN2Q9H0D6 ZNF611-217ENST00000601643 531 ntTSL 43.98□□□□□ -1.774e-7■■■■■ 29.9
XRN2Q9H0D6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.182e-7■■■■■ 29.9
XRN2Q9H0D6 TNK2-220ENST00000486523 300 ntTSL 324.43■■□□□ 1.58e-7■■■■■ 29.9
XRN2Q9H0D6 TNK2-207ENST00000427576 541 ntTSL 324.02■■□□□ 1.448e-7■■■■■ 29.9
XRN2Q9H0D6 TNK2-212ENST00000439230 2331 ntTSL 1 (best)18.4■□□□□ 0.548e-7■■■■■ 29.9
XRN2Q9H0D6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.225e-7■■■■■ 29.9
XRN2Q9H0D6 RAP1GAP-209ENST00000471600 3238 ntTSL 511.32□□□□□ -0.65e-7■■■■■ 29.9
XRN2Q9H0D6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.194e-7■■■■■ 29.9
XRN2Q9H0D6 RNF4-210ENST00000508235 603 ntTSL 317.34■□□□□ 0.374e-7■■■■■ 29.9
XRN2Q9H0D6 BOK-202ENST00000641230 183 nt11.84□□□□□ -0.517e-7■■■■■ 29.8
XRN2Q9H0D6 MVD-213ENST00000566636 863 ntTSL 323.71■■□□□ 1.392e-8■■■■■ 29.8
XRN2Q9H0D6 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.193e-7■■■■■ 29.8
XRN2Q9H0D6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.223e-7■■■■■ 29.8
XRN2Q9H0D6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.69■□□□□ 0.582e-6■■■■■ 29.8
XRN2Q9H0D6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■■■■ 29.8
XRN2Q9H0D6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.07■□□□□ 0.322e-6■■■■■ 29.8
XRN2Q9H0D6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.152e-6■■■■■ 29.8
XRN2Q9H0D6 RPL10-217ENST00000492572 1656 ntTSL 518.88■□□□□ 0.613e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.153e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-210ENST00000458500 585 ntTSL 1 (best)15.79■□□□□ 0.123e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.66■□□□□ 0.11e-12■■■■■ 29.8
XRN2Q9H0D6 RPL10-215ENST00000489200 1519 ntTSL 215.18■□□□□ 0.023e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-214ENST00000485196 839 ntTSL 214.44□□□□□ -0.13e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-207ENST00000436473 657 ntTSL 213.45□□□□□ -0.263e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-211ENST00000467168 802 ntTSL 212.92□□□□□ -0.343e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.7□□□□□ -0.383e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-216ENST00000491035 1369 ntTSL 512.68□□□□□ -0.383e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-209ENST00000451365 713 ntTSL 1 (best)12.6□□□□□ -0.391e-12■■■■■ 29.8
XRN2Q9H0D6 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.513e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-213ENST00000482732 1731 ntTSL 1 (best)11.66□□□□□ -0.543e-11■■■■■ 29.8
XRN2Q9H0D6 RPL10-201ENST00000344746 2278 ntAPPRIS P1 TSL 1 (best)10.5□□□□□ -0.733e-11■■■■■ 29.8
XRN2Q9H0D6 AC073869.1-201ENST00000415574 2762 ntBASIC14.62□□□□□ -0.074e-7■■■■■ 29.8
XRN2Q9H0D6 AC073869.1-202ENST00000438378 3785 ntTSL 1 (best) BASIC10.65□□□□□ -0.74e-7■■■■■ 29.8
XRN2Q9H0D6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.22■□□□□ 0.354e-7■■■■■ 29.8
XRN2Q9H0D6 SH3BP2-205ENST00000502260 727 ntTSL 317■□□□□ 0.313e-9■■■■■ 29.8
XRN2Q9H0D6 SH3BP2-226ENST00000513095 609 ntTSL 416.45■□□□□ 0.223e-9■■■■■ 29.8
XRN2Q9H0D6 PFKL-203ENST00000460020 890 ntTSL 526.68■■□□□ 1.862e-6■■■■■ 29.7
XRN2Q9H0D6 BSG-209ENST00000574970 570 ntTSL 426.34■■□□□ 1.813e-9■■■■■ 29.7
XRN2Q9H0D6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.21■■□□□ 1.472e-7■■■■■ 29.7
XRN2Q9H0D6 PLEKHH3-202ENST00000456950 2406 ntTSL 223.64■■□□□ 1.382e-7■■■■■ 29.7
XRN2Q9H0D6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.95■■□□□ 1.272e-7■■■■■ 29.7
XRN2Q9H0D6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.95■■□□□ 1.272e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-208ENST00000573784 559 ntTSL 422.82■■□□□ 1.243e-9■■■■■ 29.7
XRN2Q9H0D6 BSG-212ENST00000590218 545 ntTSL 222.31■■□□□ 1.161e-6■■■■■ 29.7
XRN2Q9H0D6 PLEKHH3-205ENST00000591196 2640 ntTSL 1 (best)21.83■■□□□ 1.092e-7■■■■■ 29.7
XRN2Q9H0D6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.022e-7■■■■■ 29.7
Retrieved 100 of 21,068 protein–RNA pairs in 336.7 ms