RNA–Protein interactions for RNA: ENST00000591196.5

PLEKHH3-205, Transcript of pleckstrin homology, MyTH4 and FERM domain containing H3, humanhuman

TSL 1 (best)

Gene PLEKHH3, Length 2,640 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHH3-205ENST00000591196 NISCHQ9Y2I1 1504 aa45.49■■■■■ 4.87
PLEKHH3-205ENST00000591196 SHROOM4Q9ULL8 1493 aa39■■■■□ 3.83
PLEKHH3-205ENST00000591196 ZCCHC6Q5VYS8 1495 aaKnown RBP38.51■■■■□ 3.76
PLEKHH3-205ENST00000591196 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.75
PLEKHH3-205ENST00000591196 SUPT5HO00267 1087 aaKnown RBP38.38■■■■□ 3.73
PLEKHH3-205ENST00000591196 DCAF8L2P0C7V8 631 aa37.71■■■■□ 3.63
PLEKHH3-205ENST00000591196 CHIC1Q5VXU3 224 aa37.44■■■■□ 3.58
PLEKHH3-205ENST00000591196 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
PLEKHH3-205ENST00000591196 DCAF1Q9Y4B6 1507 aa37.29■■■■□ 3.56
PLEKHH3-205ENST00000591196 HRCP23327 699 aa36.7■■■■□ 3.47
PLEKHH3-205ENST00000591196 PCGF6Q9BYE7 350 aa36.54■■■■□ 3.44
PLEKHH3-205ENST00000591196 ABCC9O60706 1549 aa36.38■■■■□ 3.41
PLEKHH3-205ENST00000591196 LOC105371045A0A1W2PR82 267 aa36.37■■■■□ 3.41
PLEKHH3-205ENST00000591196 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
PLEKHH3-205ENST00000591196 RSF1Q96T23 1441 aaPredicted RBP36.11■■■■□ 3.37
PLEKHH3-205ENST00000591196 PPARGC1BQ86YN6 1023 aaKnown RBP35.92■■■■□ 3.34
PLEKHH3-205ENST00000591196 TRIM26Q12899 539 aaPredicted RBP35.77■■■■□ 3.32
PLEKHH3-205ENST00000591196 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.31
PLEKHH3-205ENST00000591196 TRIM41Q8WV44 630 aa35.72■■■■□ 3.31
PLEKHH3-205ENST00000591196 NACADO15069 1562 aa35.57■■■■□ 3.28
PLEKHH3-205ENST00000591196 CECR2Q9BXF3 1484 aa35.5■■■■□ 3.27
PLEKHH3-205ENST00000591196 FAM9AQ8IZU1 332 aaPredicted RBP35.46■■■■□ 3.27
PLEKHH3-205ENST00000591196 MROH2BQ7Z745 1585 aa35.4■■■■□ 3.26
PLEKHH3-205ENST00000591196 PELP1Q8IZL8 1130 aaKnown RBP35.26■■■■□ 3.23
PLEKHH3-205ENST00000591196 WIZO95785 1651 aa35.22■■■■□ 3.23
PLEKHH3-205ENST00000591196 EHMT2Q96KQ7 1210 aa35.16■■■■□ 3.22
PLEKHH3-205ENST00000591196 ZEB1P37275 1124 aaPredicted RBP35.07■■■■□ 3.21
PLEKHH3-205ENST00000591196 BAZ1AQ9NRL2 1556 aaPredicted RBP34.99■■■■□ 3.19
PLEKHH3-205ENST00000591196 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
PLEKHH3-205ENST00000591196 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
PLEKHH3-205ENST00000591196 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
PLEKHH3-205ENST00000591196 CCDC88BA6NC98 1476 aa34.54■■■■□ 3.12
PLEKHH3-205ENST00000591196 ABCC8Q09428 1581 aa34.53■■■■□ 3.12
PLEKHH3-205ENST00000591196 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
PLEKHH3-205ENST00000591196 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
PLEKHH3-205ENST00000591196 SCAF1Q9H7N4 1312 aaKnown RBP34.44■■■■□ 3.1
PLEKHH3-205ENST00000591196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.31■■■■□ 3.08
PLEKHH3-205ENST00000591196 SOGA1O94964 1423 aa34.27■■■■□ 3.08
PLEKHH3-205ENST00000591196 WRNQ14191 1432 aaPredicted RBP eCLIP34.23■■■■□ 3.07
PLEKHH3-205ENST00000591196 CCER1Q8TC90 406 aaPredicted RBP34.22■■■■□ 3.07
PLEKHH3-205ENST00000591196 CEP162Q5TB80 1403 aa34.21■■■■□ 3.07
PLEKHH3-205ENST00000591196 TNIKQ9UKE5 1360 aa34.14■■■■□ 3.06
PLEKHH3-205ENST00000591196 CSRNP3Q8WYN3 585 aa34.1■■■■□ 3.05
PLEKHH3-205ENST00000591196 RUSC2Q8N2Y8 1516 aa34.1■■■■□ 3.05
PLEKHH3-205ENST00000591196 TTBK1Q5TCY1 1321 aaPredicted RBP34.09■■■■□ 3.05
PLEKHH3-205ENST00000591196 EEA1Q15075 1411 aa34.09■■■■□ 3.05
PLEKHH3-205ENST00000591196 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.05
PLEKHH3-205ENST00000591196 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
PLEKHH3-205ENST00000591196 UBTFP17480 764 aaKnown RBP34■■■■□ 3.03
PLEKHH3-205ENST00000591196 MYT1Q01538 1121 aa33.92■■■■□ 3.02
PLEKHH3-205ENST00000591196 GOLGA3Q08378 1498 aa33.89■■■■□ 3.02
PLEKHH3-205ENST00000591196 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
PLEKHH3-205ENST00000591196 SYNJ1O43426 1573 aa33.73■■■□□ 2.99
PLEKHH3-205ENST00000591196 DIEXFQ68CQ4 756 aaKnown RBP33.68■■■□□ 2.98
PLEKHH3-205ENST00000591196 CEP164Q9UPV0 1460 aa33.67■■■□□ 2.98
PLEKHH3-205ENST00000591196 ATAD2BQ9ULI0 1458 aa33.65■■■□□ 2.98
PLEKHH3-205ENST00000591196 KIF21BO75037 1637 aa33.61■■■□□ 2.97
PLEKHH3-205ENST00000591196 ACIN1Q9UKV3 1341 aaKnown RBP33.6■■■□□ 2.97
PLEKHH3-205ENST00000591196 BAZ1BQ9UIG0 1483 aaKnown RBP33.56■■■□□ 2.96
PLEKHH3-205ENST00000591196 CLIP1P30622 1438 aa33.53■■■□□ 2.96
PLEKHH3-205ENST00000591196 NEUROD1Q13562 356 aa33.51■■■□□ 2.96
PLEKHH3-205ENST00000591196 RAPGEF2Q9Y4G8 1499 aa33.41■■■□□ 2.94
PLEKHH3-205ENST00000591196 VPS8Q8N3P4 1428 aa33.41■■■□□ 2.94
PLEKHH3-205ENST00000591196 HNRNPUL2Q1KMD3 747 aaKnown RBP33.4■■■□□ 2.94
PLEKHH3-205ENST00000591196 ZNF316A6NFI3 1004 aaPredicted RBP33.38■■■□□ 2.93
PLEKHH3-205ENST00000591196 CENPBP07199 599 aaPredicted RBP33.32■■■□□ 2.92
PLEKHH3-205ENST00000591196 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
PLEKHH3-205ENST00000591196 APLP2Q06481 763 aa33.28■■■□□ 2.92
PLEKHH3-205ENST00000591196 GTF3C3Q9Y5Q9 886 aa33.28■■■□□ 2.92
PLEKHH3-205ENST00000591196 RANGAP1P46060 587 aaPredicted RBP33.27■■■□□ 2.92
PLEKHH3-205ENST00000591196 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
PLEKHH3-205ENST00000591196 PRXQ9BXM0 1461 aa33.04■■■□□ 2.88
PLEKHH3-205ENST00000591196 ERICH3Q5RHP9 1530 aa33.03■■■□□ 2.88
PLEKHH3-205ENST00000591196 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
PLEKHH3-205ENST00000591196 MIER1Q8N108 512 aa32.95■■■□□ 2.87
PLEKHH3-205ENST00000591196 NCAPD3P42695 1498 aa32.94■■■□□ 2.86
PLEKHH3-205ENST00000591196 HMGXB3Q12766 1538 aa32.93■■■□□ 2.86
PLEKHH3-205ENST00000591196 CUX1P39880 1505 aa32.92■■■□□ 2.86
PLEKHH3-205ENST00000591196 YTHDC1Q96MU7 727 aaKnown RBP32.91■■■□□ 2.86
PLEKHH3-205ENST00000591196 KANK4Q5T7N3 995 aaPredicted RBP32.85■■■□□ 2.85
PLEKHH3-205ENST00000591196 KIF27Q86VH2 1401 aa32.83■■■□□ 2.85
PLEKHH3-205ENST00000591196 DHX57Q6P158 1386 aaKnown RBP32.77■■■□□ 2.84
PLEKHH3-205ENST00000591196 CLSPNQ9HAW4 1339 aa32.75■■■□□ 2.83
PLEKHH3-205ENST00000591196 CFTRP13569 1480 aa32.75■■■□□ 2.83
PLEKHH3-205ENST00000591196 RRBP1Q9P2E9 1410 aaKnown RBP32.66■■■□□ 2.82
PLEKHH3-205ENST00000591196 ARHGAP35Q9NRY4 1499 aa32.64■■■□□ 2.81
PLEKHH3-205ENST00000591196 CCNB3Q8WWL7 1395 aa32.53■■■□□ 2.8
PLEKHH3-205ENST00000591196 CUX2O14529 1486 aa32.5■■■□□ 2.79
PLEKHH3-205ENST00000591196 IGF1RP08069 1367 aa32.48■■■□□ 2.79
PLEKHH3-205ENST00000591196 PRDM2Q13029 1718 aa32.44■■■□□ 2.78
PLEKHH3-205ENST00000591196 ITGAEP38570 1179 aa32.42■■■□□ 2.78
PLEKHH3-205ENST00000591196 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
PLEKHH3-205ENST00000591196 CARMIL1Q5VZK9 1371 aa32.34■■■□□ 2.77
PLEKHH3-205ENST00000591196 TIAM1Q13009 1591 aa32.31■■■□□ 2.76
PLEKHH3-205ENST00000591196 FGD5Q6ZNL6 1462 aa32.3■■■□□ 2.76
PLEKHH3-205ENST00000591196 MAP3K1Q13233 1512 aa32.28■■■□□ 2.76
PLEKHH3-205ENST00000591196 RAB3GAP2Q9H2M9 1393 aa32.27■■■□□ 2.76
PLEKHH3-205ENST00000591196 LRRC9Q6ZRR7 1453 aa32.2■■■□□ 2.75
PLEKHH3-205ENST00000591196 MAPKBP1O60336 1514 aa32.17■■■□□ 2.74
PLEKHH3-205ENST00000591196 PHLDB1Q86UU1 1377 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms