RNA–Protein interactions for RNA: ENST00000439230.5

TNK2-212, Transcript of tyrosine kinase non receptor 2, humanhuman

TSL 1 (best)

Gene TNK2, Length 2,331 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNK2-212ENST00000439230 NISCHQ9Y2I1 1504 aa38.82■■■■□ 3.8
TNK2-212ENST00000439230 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
TNK2-212ENST00000439230 SHROOM4Q9ULL8 1493 aa32.81■■■□□ 2.84
TNK2-212ENST00000439230 ZCCHC6Q5VYS8 1495 aaKnown RBP32.79■■■□□ 2.84
TNK2-212ENST00000439230 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
TNK2-212ENST00000439230 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
TNK2-212ENST00000439230 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
TNK2-212ENST00000439230 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
TNK2-212ENST00000439230 MYO15BQ96JP2 1530 aa31.08■■■□□ 2.57
TNK2-212ENST00000439230 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
TNK2-212ENST00000439230 ABCC9O60706 1549 aa30.88■■■□□ 2.53
TNK2-212ENST00000439230 NACADO15069 1562 aa30.71■■■□□ 2.51
TNK2-212ENST00000439230 RSF1Q96T23 1441 aaPredicted RBP30.6■■■□□ 2.49
TNK2-212ENST00000439230 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.43
TNK2-212ENST00000439230 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
TNK2-212ENST00000439230 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
TNK2-212ENST00000439230 LOC105371045A0A1W2PR82 267 aa30.13■■■□□ 2.41
TNK2-212ENST00000439230 WIZO95785 1651 aa29.98■■■□□ 2.39
TNK2-212ENST00000439230 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
TNK2-212ENST00000439230 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
TNK2-212ENST00000439230 PCGF6Q9BYE7 350 aa29.84■■■□□ 2.37
TNK2-212ENST00000439230 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
TNK2-212ENST00000439230 HRCP23327 699 aa29.68■■■□□ 2.34
TNK2-212ENST00000439230 FAM9AQ8IZU1 332 aaPredicted RBP29.62■■■□□ 2.33
TNK2-212ENST00000439230 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
TNK2-212ENST00000439230 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
TNK2-212ENST00000439230 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
TNK2-212ENST00000439230 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
TNK2-212ENST00000439230 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
TNK2-212ENST00000439230 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
TNK2-212ENST00000439230 CCDC88BA6NC98 1476 aa29.38■■■□□ 2.29
TNK2-212ENST00000439230 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
TNK2-212ENST00000439230 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
TNK2-212ENST00000439230 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
TNK2-212ENST00000439230 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
TNK2-212ENST00000439230 PPARGC1BQ86YN6 1023 aaKnown RBP29.06■■■□□ 2.24
TNK2-212ENST00000439230 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
TNK2-212ENST00000439230 SOGA1O94964 1423 aa28.87■■■□□ 2.21
TNK2-212ENST00000439230 BAZ1BQ9UIG0 1483 aaKnown RBP28.82■■■□□ 2.2
TNK2-212ENST00000439230 WRNQ14191 1432 aaPredicted RBP eCLIP28.76■■■□□ 2.19
TNK2-212ENST00000439230 RUSC2Q8N2Y8 1516 aa28.73■■■□□ 2.19
TNK2-212ENST00000439230 EEA1Q15075 1411 aa28.73■■■□□ 2.19
TNK2-212ENST00000439230 CSRNP3Q8WYN3 585 aa28.7■■■□□ 2.19
TNK2-212ENST00000439230 ZEB1P37275 1124 aaPredicted RBP28.63■■■□□ 2.17
TNK2-212ENST00000439230 CEP162Q5TB80 1403 aa28.63■■■□□ 2.17
TNK2-212ENST00000439230 TNIKQ9UKE5 1360 aa28.62■■■□□ 2.17
TNK2-212ENST00000439230 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
TNK2-212ENST00000439230 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
TNK2-212ENST00000439230 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
TNK2-212ENST00000439230 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
TNK2-212ENST00000439230 HMGXB3Q12766 1538 aa28.39■■■□□ 2.14
TNK2-212ENST00000439230 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
TNK2-212ENST00000439230 KIF21BO75037 1637 aa28.35■■■□□ 2.13
TNK2-212ENST00000439230 TTBK1Q5TCY1 1321 aaPredicted RBP28.34■■■□□ 2.13
TNK2-212ENST00000439230 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
TNK2-212ENST00000439230 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
TNK2-212ENST00000439230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
TNK2-212ENST00000439230 RAPGEF2Q9Y4G8 1499 aa28.19■■■□□ 2.1
TNK2-212ENST00000439230 CLIP1P30622 1438 aa28.15■■■□□ 2.1
TNK2-212ENST00000439230 CCER1Q8TC90 406 aaPredicted RBP28.14■■■□□ 2.1
TNK2-212ENST00000439230 CFTRP13569 1480 aa28.11■■■□□ 2.09
TNK2-212ENST00000439230 CUX1P39880 1505 aa28.09■■■□□ 2.09
TNK2-212ENST00000439230 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
TNK2-212ENST00000439230 RANGAP1P46060 587 aaPredicted RBP27.99■■■□□ 2.07
TNK2-212ENST00000439230 PRXQ9BXM0 1461 aa27.96■■■□□ 2.07
TNK2-212ENST00000439230 ERICH3Q5RHP9 1530 aa27.94■■■□□ 2.06
TNK2-212ENST00000439230 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
TNK2-212ENST00000439230 PRDM2Q13029 1718 aa27.89■■■□□ 2.06
TNK2-212ENST00000439230 APLP2Q06481 763 aa27.86■■■□□ 2.05
TNK2-212ENST00000439230 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
TNK2-212ENST00000439230 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
TNK2-212ENST00000439230 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
TNK2-212ENST00000439230 HNRNPUL2Q1KMD3 747 aaKnown RBP27.73■■■□□ 2.03
TNK2-212ENST00000439230 CUX2O14529 1486 aa27.67■■■□□ 2.02
TNK2-212ENST00000439230 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
TNK2-212ENST00000439230 IGF1RP08069 1367 aa27.62■■■□□ 2.01
TNK2-212ENST00000439230 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
TNK2-212ENST00000439230 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
TNK2-212ENST00000439230 PELP1Q8IZL8 1130 aaKnown RBP27.54■■■□□ 2
TNK2-212ENST00000439230 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
TNK2-212ENST00000439230 CARMIL1Q5VZK9 1371 aa27.49■■□□□ 1.99
TNK2-212ENST00000439230 DIEXFQ68CQ4 756 aaKnown RBP27.44■■□□□ 1.98
TNK2-212ENST00000439230 NESP48681 1621 aa27.43■■□□□ 1.98
TNK2-212ENST00000439230 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
TNK2-212ENST00000439230 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
TNK2-212ENST00000439230 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
TNK2-212ENST00000439230 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
TNK2-212ENST00000439230 ZNF316A6NFI3 1004 aaPredicted RBP27.33■■□□□ 1.97
TNK2-212ENST00000439230 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
TNK2-212ENST00000439230 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
TNK2-212ENST00000439230 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
TNK2-212ENST00000439230 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
TNK2-212ENST00000439230 TIAM1Q13009 1591 aa27.2■■□□□ 1.95
TNK2-212ENST00000439230 DHX57Q6P158 1386 aaKnown RBP27.19■■□□□ 1.94
TNK2-212ENST00000439230 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
TNK2-212ENST00000439230 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
TNK2-212ENST00000439230 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
TNK2-212ENST00000439230 SCAF1Q9H7N4 1312 aaKnown RBP27.14■■□□□ 1.94
TNK2-212ENST00000439230 CLSPNQ9HAW4 1339 aa27.14■■□□□ 1.94
TNK2-212ENST00000439230 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms