Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF555Q8NEP9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZNF555Q8NEP9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF555Q8NEP9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF555Q8NEP9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF555Q8NEP9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF555Q8NEP9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF555Q8NEP9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF555Q8NEP9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF555Q8NEP9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF555Q8NEP9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 AC144652.1-201ENST00000609974 1624 ntBASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF555Q8NEP9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF555Q8NEP9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ZNF555Q8NEP9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF555Q8NEP9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF555Q8NEP9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF555Q8NEP9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF555Q8NEP9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF555Q8NEP9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF555Q8NEP9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 LONRF2P2-201ENST00000439212 571 ntBASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms