Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2AP49459 AL451085.2-201ENST00000605085 799 ntBASIC13.78□□□□□ -0.2
UBE2AP49459 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.78□□□□□ -0.2
UBE2AP49459 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2AP49459 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2AP49459 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBE2AP49459 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2AP49459 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBE2AP49459 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2AP49459 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2AP49459 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2AP49459 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBE2AP49459 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2AP49459 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBE2AP49459 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBE2AP49459 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.77□□□□□ -0.21
UBE2AP49459 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.77□□□□□ -0.21
UBE2AP49459 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.77□□□□□ -0.21
UBE2AP49459 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.77□□□□□ -0.21
UBE2AP49459 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.77□□□□□ -0.21
UBE2AP49459 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2AP49459 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC13.76□□□□□ -0.21
UBE2AP49459 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC13.76□□□□□ -0.21
UBE2AP49459 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.76□□□□□ -0.21
UBE2AP49459 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UBE2AP49459 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBE2AP49459 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
UBE2AP49459 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UBE2AP49459 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBE2AP49459 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC13.76□□□□□ -0.21
UBE2AP49459 LINC01529-204ENST00000636474 1715 ntBASIC13.76□□□□□ -0.21
UBE2AP49459 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC13.75□□□□□ -0.21
UBE2AP49459 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.75□□□□□ -0.21
UBE2AP49459 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
UBE2AP49459 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.75□□□□□ -0.21
UBE2AP49459 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UBE2AP49459 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
UBE2AP49459 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
UBE2AP49459 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.75□□□□□ -0.21
UBE2AP49459 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBE2AP49459 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
UBE2AP49459 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
UBE2AP49459 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
UBE2AP49459 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.74□□□□□ -0.21
UBE2AP49459 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 C1orf229-201ENST00000623686 2258 ntBASIC13.74□□□□□ -0.21
UBE2AP49459 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UBE2AP49459 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC13.74□□□□□ -0.21
UBE2AP49459 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
UBE2AP49459 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC13.74□□□□□ -0.21
UBE2AP49459 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBE2AP49459 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.74□□□□□ -0.21
UBE2AP49459 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms