Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCN1P31025 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.15■□□□□ 0.82
LCN1P31025 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LCN1P31025 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.15■□□□□ 0.82
LCN1P31025 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.15■□□□□ 0.82
LCN1P31025 AL136162.1-201ENST00000607711 1078 ntBASIC20.15■□□□□ 0.82
LCN1P31025 AC087239.1-201ENST00000622671 572 ntBASIC20.15■□□□□ 0.82
LCN1P31025 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.15■□□□□ 0.82
LCN1P31025 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LCN1P31025 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCN1P31025 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LCN1P31025 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCN1P31025 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LCN1P31025 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCN1P31025 AC135279.3-201ENST00000610945 1311 ntBASIC20.14■□□□□ 0.81
LCN1P31025 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.14■□□□□ 0.81
LCN1P31025 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.14■□□□□ 0.81
LCN1P31025 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.14■□□□□ 0.81
LCN1P31025 AP005435.1-201ENST00000529293 1178 ntBASIC20.14■□□□□ 0.81
LCN1P31025 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.14■□□□□ 0.81
LCN1P31025 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.14■□□□□ 0.81
LCN1P31025 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.14■□□□□ 0.81
LCN1P31025 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCN1P31025 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCN1P31025 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCN1P31025 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
LCN1P31025 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.13■□□□□ 0.81
LCN1P31025 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LCN1P31025 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.12■□□□□ 0.81
LCN1P31025 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LCN1P31025 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LCN1P31025 BX842568.3-201ENST00000418104 571 ntBASIC20.12■□□□□ 0.81
LCN1P31025 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.12■□□□□ 0.81
LCN1P31025 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LCN1P31025 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.12■□□□□ 0.81
LCN1P31025 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.12■□□□□ 0.81
LCN1P31025 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCN1P31025 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.12■□□□□ 0.81
LCN1P31025 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.12■□□□□ 0.81
LCN1P31025 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCN1P31025 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LCN1P31025 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.11■□□□□ 0.81
LCN1P31025 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCN1P31025 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCN1P31025 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LCN1P31025 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.11■□□□□ 0.81
LCN1P31025 AC024257.2-201ENST00000549699 147 ntBASIC20.11■□□□□ 0.81
LCN1P31025 AC106739.1-201ENST00000617035 715 ntBASIC20.11■□□□□ 0.81
LCN1P31025 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCN1P31025 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCN1P31025 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LCN1P31025 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LCN1P31025 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.1■□□□□ 0.81
LCN1P31025 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.1■□□□□ 0.81
LCN1P31025 AC096631.2-201ENST00000436136 790 ntBASIC20.1■□□□□ 0.81
LCN1P31025 AC133561.4-201ENST00000566112 224 ntBASIC20.1■□□□□ 0.81
LCN1P31025 MIR4767-201ENST00000582827 78 ntBASIC20.1■□□□□ 0.81
LCN1P31025 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCN1P31025 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCN1P31025 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.09■□□□□ 0.81
LCN1P31025 AC233723.2-201ENST00000623798 2106 ntBASIC20.09■□□□□ 0.81
LCN1P31025 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN1P31025 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCN1P31025 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCN1P31025 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN1P31025 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCN1P31025 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.09■□□□□ 0.81
LCN1P31025 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LCN1P31025 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LCN1P31025 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
LCN1P31025 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.09■□□□□ 0.81
LCN1P31025 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.09■□□□□ 0.81
LCN1P31025 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms