Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFS3O75489 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFS3O75489 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFS3O75489 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFS3O75489 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.74■■□□□ 1.07
NDUFS3O75489 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.73■■□□□ 1.07
NDUFS3O75489 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NDUFS3O75489 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NDUFS3O75489 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.73■■□□□ 1.07
NDUFS3O75489 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.73■■□□□ 1.07
NDUFS3O75489 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.73■■□□□ 1.07
NDUFS3O75489 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NDUFS3O75489 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDUFS3O75489 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.72■■□□□ 1.07
NDUFS3O75489 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.72■■□□□ 1.07
NDUFS3O75489 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.72■■□□□ 1.07
NDUFS3O75489 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.72■■□□□ 1.07
NDUFS3O75489 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.72■■□□□ 1.07
NDUFS3O75489 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDUFS3O75489 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NDUFS3O75489 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NDUFS3O75489 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.71■■□□□ 1.07
NDUFS3O75489 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NDUFS3O75489 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NDUFS3O75489 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.71■■□□□ 1.07
NDUFS3O75489 CA15P2-201ENST00000611168 834 ntBASIC21.71■■□□□ 1.07
NDUFS3O75489 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.71■■□□□ 1.07
NDUFS3O75489 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NDUFS3O75489 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NDUFS3O75489 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NDUFS3O75489 AC008406.3-201ENST00000620001 1374 ntBASIC21.71■■□□□ 1.07
NDUFS3O75489 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NDUFS3O75489 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.71■■□□□ 1.07
NDUFS3O75489 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.71■■□□□ 1.07
NDUFS3O75489 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NDUFS3O75489 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NDUFS3O75489 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 OR2I1P-207ENST00000453522 948 ntBASIC21.7■■□□□ 1.06
NDUFS3O75489 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.7■■□□□ 1.06
NDUFS3O75489 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.7■■□□□ 1.06
NDUFS3O75489 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.7■■□□□ 1.06
NDUFS3O75489 AC011298.3-201ENST00000615796 283 ntBASIC21.7■■□□□ 1.06
NDUFS3O75489 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NDUFS3O75489 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.7■■□□□ 1.06
NDUFS3O75489 AC137767.1-201ENST00000602918 1920 ntBASIC21.7■■□□□ 1.06
NDUFS3O75489 AC139530.1-201ENST00000575312 1977 ntBASIC21.7■■□□□ 1.06
NDUFS3O75489 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
NDUFS3O75489 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NDUFS3O75489 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NDUFS3O75489 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFS3O75489 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.69■■□□□ 1.06
NDUFS3O75489 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFS3O75489 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
NDUFS3O75489 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.69■■□□□ 1.06
NDUFS3O75489 AL031602.1-201ENST00000633169 911 ntBASIC21.69■■□□□ 1.06
NDUFS3O75489 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFS3O75489 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFS3O75489 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NDUFS3O75489 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFS3O75489 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NDUFS3O75489 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NDUFS3O75489 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
NDUFS3O75489 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFS3O75489 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.68■■□□□ 1.06
NDUFS3O75489 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
NDUFS3O75489 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFS3O75489 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFS3O75489 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFS3O75489 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFS3O75489 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.68■■□□□ 1.06
NDUFS3O75489 AC136469.2-201ENST00000623944 1028 ntBASIC21.68■■□□□ 1.06
NDUFS3O75489 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.68■■□□□ 1.06
NDUFS3O75489 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.68■■□□□ 1.06
NDUFS3O75489 AC092053.2-201ENST00000640557 1818 ntBASIC21.68■■□□□ 1.06
NDUFS3O75489 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NDUFS3O75489 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms