Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
SSNA1O43805 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.58■□□□□ 0.57
SSNA1O43805 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSNA1O43805 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SSNA1O43805 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSNA1O43805 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.58■□□□□ 0.56
SSNA1O43805 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 LINC01971-201ENST00000617888 1048 ntBASIC18.58■□□□□ 0.56
SSNA1O43805 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSNA1O43805 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.57■□□□□ 0.56
SSNA1O43805 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.57■□□□□ 0.56
SSNA1O43805 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
SSNA1O43805 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SSNA1O43805 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SSNA1O43805 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSNA1O43805 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSNA1O43805 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSNA1O43805 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSNA1O43805 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.56■□□□□ 0.56
SSNA1O43805 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
SSNA1O43805 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.56■□□□□ 0.56
SSNA1O43805 AL022069.1-201ENST00000568025 1636 ntBASIC18.56■□□□□ 0.56
SSNA1O43805 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SSNA1O43805 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SSNA1O43805 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SSNA1O43805 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSNA1O43805 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SSNA1O43805 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.56■□□□□ 0.56
SSNA1O43805 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSNA1O43805 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.55■□□□□ 0.56
SSNA1O43805 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.55■□□□□ 0.56
SSNA1O43805 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.55■□□□□ 0.56
SSNA1O43805 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.55■□□□□ 0.56
SSNA1O43805 AC025884.2-201ENST00000553429 711 ntBASIC18.55■□□□□ 0.56
SSNA1O43805 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SSNA1O43805 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.55■□□□□ 0.56
SSNA1O43805 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSNA1O43805 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.54■□□□□ 0.56
SSNA1O43805 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSNA1O43805 AC087742.1-201ENST00000575880 1738 ntBASIC18.54■□□□□ 0.56
SSNA1O43805 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 ALDH1A3-203ENST00000557963 1670 ntBASIC18.54■□□□□ 0.56
SSNA1O43805 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SSNA1O43805 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 KRT18P10-201ENST00000388836 1287 ntBASIC18.54■□□□□ 0.56
SSNA1O43805 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SSNA1O43805 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.54■□□□□ 0.56
SSNA1O43805 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 AC244015.2-201ENST00000616358 1861 ntBASIC18.54■□□□□ 0.56
SSNA1O43805 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSNA1O43805 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSNA1O43805 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSNA1O43805 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSNA1O43805 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSNA1O43805 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSNA1O43805 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SSNA1O43805 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSNA1O43805 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.53■□□□□ 0.56
SSNA1O43805 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSNA1O43805 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SSNA1O43805 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.52■□□□□ 0.56
SSNA1O43805 AC090877.2-201ENST00000558441 1738 ntBASIC18.52■□□□□ 0.56
SSNA1O43805 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SSNA1O43805 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSNA1O43805 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSNA1O43805 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.52■□□□□ 0.56
SSNA1O43805 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSNA1O43805 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SSNA1O43805 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.52■□□□□ 0.55
SSNA1O43805 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSNA1O43805 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.51■□□□□ 0.55
SSNA1O43805 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.51■□□□□ 0.55
SSNA1O43805 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SSNA1O43805 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms