Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NICN1Q9BSH3 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC020907.1-201ENST00000616460 1350 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 RNA5SP491-201ENST00000362936 118 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 RN7SL351P-201ENST00000469306 248 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SUPT4H1P2-201ENST00000501248 353 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 MIR3180-2-201ENST00000581748 88 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC023509.4-201ENST00000602306 775 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC010326.4-202ENST00000603829 541 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC010326.4-201ENST00000604665 891 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC097724.1-201ENST00000609581 426 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 FRG2EP-201ENST00000634243 835 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC11.04□□□□□ -0.64
NICN1Q9BSH3 AL358933.1-201ENST00000565046 2830 ntBASIC11.04□□□□□ -0.64
NICN1Q9BSH3 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NICN1Q9BSH3 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms