Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 CPNE1-214ENST00000435747 400 ntTSL 39.22□□□□□ -0.931e-7■■■■□ 26.7
EXOSC5Q9NQT4 CHD4-214ENST00000545942 1317 ntTSL 1 (best)17.58■□□□□ 0.41e-7■■■■□ 26.7
EXOSC5Q9NQT4 CHD4-213ENST00000545584 553 ntTSL 415.4■□□□□ 0.061e-7■■■■□ 26.7
EXOSC5Q9NQT4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.11e-7■■■■□ 26.7
EXOSC5Q9NQT4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.211e-7■■■■□ 26.7
EXOSC5Q9NQT4 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.7□□□□□ -0.541e-7■■■■□ 26.7
EXOSC5Q9NQT4 SSBP2-213ENST00000509743 779 ntTSL 46.83□□□□□ -1.322e-6■■■■□ 26.7
EXOSC5Q9NQT4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.353e-8■■■■□ 26.7
EXOSC5Q9NQT4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.04■□□□□ 0.163e-8■■■■□ 26.7
EXOSC5Q9NQT4 RAC1-204ENST00000488373 845 ntTSL 1 (best)14□□□□□ -0.173e-8■■■■□ 26.7
EXOSC5Q9NQT4 RAC1-206ENST00000497741 651 ntTSL 27.89□□□□□ -1.153e-8■■■■□ 26.7
EXOSC5Q9NQT4 SMYD3-212ENST00000483072 466 ntTSL 26.74□□□□□ -1.339e-7■■■■□ 26.7
EXOSC5Q9NQT4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.081e-6■■■■□ 26.7
EXOSC5Q9NQT4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.241e-6■■■■□ 26.7
EXOSC5Q9NQT4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.271e-6■■■■□ 26.7
EXOSC5Q9NQT4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.291e-6■■■■□ 26.7
EXOSC5Q9NQT4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.671e-6■■■■□ 26.7
EXOSC5Q9NQT4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.428e-7■■■■□ 26.7
EXOSC5Q9NQT4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.16□□□□□ -0.32e-6■■■■□ 26.7
EXOSC5Q9NQT4 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.862e-6■■■■□ 26.7
EXOSC5Q9NQT4 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.954e-7■■■■□ 26.7
EXOSC5Q9NQT4 HBG2-202ENST00000380252 694 ntTSL 3 BASIC8.28□□□□□ -1.084e-7■■■■□ 26.7
EXOSC5Q9NQT4 MBOAT2-207ENST00000477073 754 ntTSL 317.62■□□□□ 0.414e-7■■■■□ 26.6
EXOSC5Q9NQT4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.214e-7■■■■□ 26.6
EXOSC5Q9NQT4 MBOAT2-203ENST00000462696 580 ntTSL 412.98□□□□□ -0.334e-7■■■■□ 26.6
EXOSC5Q9NQT4 MBOAT2-209ENST00000486484 1351 ntTSL 23.65□□□□□ -1.824e-7■■■■□ 26.6
EXOSC5Q9NQT4 PCNT-205ENST00000480896 10485 ntTSL 1 (best)10.07□□□□□ -0.82e-7■■■■□ 26.6
EXOSC5Q9NQT4 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.832e-7■■■■□ 26.6
EXOSC5Q9NQT4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-6■■■■□ 26.6
EXOSC5Q9NQT4 BLOC1S5-201ENST00000244777 2445 ntTSL 1 (best)13.91□□□□□ -0.182e-6■■■■□ 26.6
EXOSC5Q9NQT4 BLOC1S5-206ENST00000627748 1273 ntTSL 1 (best)11.91□□□□□ -0.52e-6■■■■□ 26.6
EXOSC5Q9NQT4 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.732e-6■■■■□ 26.6
EXOSC5Q9NQT4 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC10.4□□□□□ -0.742e-6■■■■□ 26.6
EXOSC5Q9NQT4 BLOC1S5-204ENST00000486432 423 ntTSL 55.33□□□□□ -1.562e-6■■■■□ 26.6
EXOSC5Q9NQT4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.652e-6■■■■□ 26.6
EXOSC5Q9NQT4 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)9.68□□□□□ -0.862e-7■■■■□ 26.6
EXOSC5Q9NQT4 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.192e-7■■■■□ 26.6
EXOSC5Q9NQT4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.86□□□□□ -1.312e-7■■■■□ 26.6
EXOSC5Q9NQT4 AC087380.1-201ENST00000420465 1001 ntTSL 36.03□□□□□ -1.442e-7■■■■□ 26.6
EXOSC5Q9NQT4 AC087380.1-203ENST00000420726 752 ntTSL 55.16□□□□□ -1.582e-7■■■■□ 26.6
EXOSC5Q9NQT4 HBE1-203ENST00000396895 578 ntTSL 54.6□□□□□ -1.672e-7■■■■□ 26.6
EXOSC5Q9NQT4 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC10.39□□□□□ -0.752e-6■■■■□ 26.6
EXOSC5Q9NQT4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■■■□ 26.6
EXOSC5Q9NQT4 CEP192-211ENST00000513432 8635 ntTSL 1 (best)6.57□□□□□ -1.366e-7■■■■□ 26.6
EXOSC5Q9NQT4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.756e-7■■■■□ 26.6
EXOSC5Q9NQT4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.11□□□□□ -1.756e-7■■■■□ 26.6
EXOSC5Q9NQT4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.562e-6■■■■□ 26.6
EXOSC5Q9NQT4 PRELID2-206ENST00000510594 552 ntTSL 37.47□□□□□ -1.213e-7■■■■□ 26.6
EXOSC5Q9NQT4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.93■□□□□ 0.466e-7■■■■□ 26.6
EXOSC5Q9NQT4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.6■□□□□ 0.416e-7■■■■□ 26.6
EXOSC5Q9NQT4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.88■□□□□ 0.296e-7■■■■□ 26.6
EXOSC5Q9NQT4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.678e-7■■■■□ 26.5
EXOSC5Q9NQT4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.58□□□□□ -1.688e-7■■■■□ 26.5
EXOSC5Q9NQT4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.738e-7■■■■□ 26.5
EXOSC5Q9NQT4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4□□□□□ -1.778e-7■■■■□ 26.5
EXOSC5Q9NQT4 SACM1L-207ENST00000455997 4661 ntTSL 1 (best)18.31■□□□□ 0.522e-6■■■■□ 26.5
EXOSC5Q9NQT4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.81■□□□□ 0.442e-6■■■■□ 26.5
EXOSC5Q9NQT4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.362e-6■■■■□ 26.5
EXOSC5Q9NQT4 SACM1L-205ENST00000441228 2013 ntTSL 26.13□□□□□ -1.432e-6■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-203ENST00000518034 1047 ntTSL 28.35□□□□□ -1.077e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-212ENST00000611080 1265 ntTSL 5 BASIC7.58□□□□□ -1.27e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-205ENST00000518995 731 ntTSL 37.43□□□□□ -1.227e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-204ENST00000518949 843 ntTSL 37.43□□□□□ -1.227e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC7.37□□□□□ -1.237e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-211ENST00000522800 635 ntTSL 36.91□□□□□ -1.37e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-210ENST00000522453 518 ntTSL 36.45□□□□□ -1.387e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-206ENST00000519046 488 ntTSL 36.44□□□□□ -1.387e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-202ENST00000517974 594 ntTSL 25.66□□□□□ -1.57e-7■■■■□ 26.5
EXOSC5Q9NQT4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.627e-7■■■■□ 26.5
EXOSC5Q9NQT4 LNPK-203ENST00000409660 2028 ntTSL 1 (best)22.55■■□□□ 1.23e-7■■■■□ 26.5
EXOSC5Q9NQT4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.333e-7■■■■□ 26.5
EXOSC5Q9NQT4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.73□□□□□ -1.493e-7■■■■□ 26.5
EXOSC5Q9NQT4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.1■■□□□ 1.458e-6■■■■□ 26.5
EXOSC5Q9NQT4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.752e-7■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.7■□□□□ 0.748e-6■■■■□ 26.5
EXOSC5Q9NQT4 ANKRD28-203ENST00000439830 592 ntTSL 519.62■□□□□ 0.732e-7■■■■□ 26.5
EXOSC5Q9NQT4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.3■□□□□ 0.688e-6■■■■□ 26.5
EXOSC5Q9NQT4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.578e-6■■■■□ 26.5
EXOSC5Q9NQT4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.578e-6■■■■□ 26.5
EXOSC5Q9NQT4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.564e-7■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-211ENST00000538504 822 ntTSL 218.25■□□□□ 0.518e-6■■■■□ 26.5
EXOSC5Q9NQT4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.475e-6■■■■□ 26.5
EXOSC5Q9NQT4 HPCAL1-205ENST00000423674 586 ntTSL 417.85■□□□□ 0.455e-6■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.48■□□□□ 0.398e-6■■■■□ 26.5
EXOSC5Q9NQT4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.378e-6■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-226ENST00000557686 535 ntTSL 317.31■□□□□ 0.368e-6■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.11■□□□□ 0.338e-6■■■■□ 26.5
EXOSC5Q9NQT4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.258e-6■■■■□ 26.5
EXOSC5Q9NQT4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.46■□□□□ 0.238e-6■■■■□ 26.5
EXOSC5Q9NQT4 CHDH-203ENST00000481668 631 ntTSL 216.17■□□□□ 0.188e-6■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.03■□□□□ 0.168e-6■■■■□ 26.5
EXOSC5Q9NQT4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.147e-7■■■■□ 26.5
EXOSC5Q9NQT4 ZNF516-205ENST00000617840 2326 ntTSL 1 (best)15.94■□□□□ 0.148e-6■■■■□ 26.5
EXOSC5Q9NQT4 CHDH-202ENST00000467802 565 ntTSL 215.59■□□□□ 0.098e-6■■■■□ 26.5
EXOSC5Q9NQT4 FAM19A5-205ENST00000473898 897 ntTSL 215.17■□□□□ 0.028e-6■■■■□ 26.5
EXOSC5Q9NQT4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.85□□□□□ -0.038e-6■■■■□ 26.5
EXOSC5Q9NQT4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.078e-6■■■■□ 26.5
EXOSC5Q9NQT4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.21□□□□□ -0.148e-6■■■■□ 26.5
EXOSC5Q9NQT4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.16□□□□□ -0.148e-6■■■■□ 26.5
EXOSC5Q9NQT4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.168e-6■■■■□ 26.5
Retrieved 100 of 8,799 protein–RNA pairs in 171.9 ms